RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 SOCS3O14543 225 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 ZNF207O43670 478 aaKnown RBP7.2□□□□□ -1.26
PDPN-212ENST00000621990 HBDP02042 147 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 ZNF124Q15973 351 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 LGALS9BQ3B8N2 356 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 LGALS9CQ6DKI2 356 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 SLC25A34Q6PIV7 304 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 GPHB5Q86YW7 130 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 FLNCQ14315 2725 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 DOPEY1Q5JWR5 2465 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 IGHV4-30-2A0A087WSY4 118 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 IGHV3-49A0A0A0MS15 119 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 IGHV7-4-1A0A0J9YVY3 117 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 SMKR1H3BMG3 65 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
PDPN-212ENST00000621990 PRSS57Q6UWY2 283 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 UNQ9165/PRO28630Q6UXU0 137 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 DEFB125Q8N687 156 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 MCRIP2Q9BUT9 160 aaKnown RBP7.2□□□□□ -1.26
PDPN-212ENST00000621990 LINC00527Q9UJ94 153 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 IGSF10Q6WRI0 2623 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 IGLV1-40P01703 118 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 MSMBP08118 114 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 ORAOV1Q8WV07 137 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 ZNF580Q9UK33 172 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 GOLT1BQ9Y3E0 138 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 TMEM8BA6NDV4 472 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 SMAD7O15105 426 aaKnown RBP7.19□□□□□ -1.26
PDPN-212ENST00000621990 SNAI2O43623 268 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 TRBV12-3P01733 135 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 NPSP0C0P6 89 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 C16orf92Q96LL3 132 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 TP73-AS1Q9UF72 201 aa7.19□□□□□ -1.26
PDPN-212ENST00000621990 H3BUX3 64 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 COX8AP10176 69 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 ATP5J2P56134 94 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 CFHR3Q02985 330 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 H0Y8G0 127 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 J3KRW8 73 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 TNFRSF6BO95407 300 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 FAM19A4Q96LR4 140 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 PMCHL2Q9BQD1 86 aa7.18□□□□□ -1.26
PDPN-212ENST00000621990 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
PDPN-212ENST00000621990 GAS8-AS1O95177 125 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 FOXE3Q13461 319 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 COX11Q9Y6N1 276 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 IGLV2-18A0A075B6J9 118 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 CACNG7P62955 275 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 PRR9Q5T870 116 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 OR1N2Q8NGR9 330 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 IFI27L1Q96BM0 104 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 LINC00477Q96M19 166 aa7.17□□□□□ -1.26
PDPN-212ENST00000621990 TIMM8BQ9Y5J9 83 aaPredicted RBP7.17□□□□□ -1.26
PDPN-212ENST00000621990 OVOL1O14753 267 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 FGF6P10767 208 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 GATA3P23771 443 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 LY6EQ16553 131 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 MPV17L2Q567V2 206 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 BVES-AS1Q5T3Y7 98 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 APRG1Q8IVJ8 170 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 KLK15Q9H2R5 256 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 USP9XQ93008 2570 aaPredicted RBP7.16□□□□□ -1.26
PDPN-212ENST00000621990 TRBV7-9A0A0J9YWB2 115 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 B4DSR2 109 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 FCER1GP30273 86 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 DSCR9P59020 149 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 BLCAPP62952 87 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 C12orf54Q6X4T0 127 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 C2orf91Q6ZV80 131 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 NRACQ8N912 160 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 ZNF738Q8NE65 137 aa7.16□□□□□ -1.26
PDPN-212ENST00000621990 A0A0G2JLM5 398 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 Q6ZQT7 251 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 Q6ZS46 218 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 Q8N8P6 123 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 OR4X2Q8NGF9 303 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 SPTAN1Q13813 2472 aaKnown RBP7.15□□□□□ -1.26
PDPN-212ENST00000621990 CRYBG3Q68DQ2 2970 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 AVPP01185 164 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 EVI2AP22794 236 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 FXYD7P58549 80 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 OR2K2Q8NGT1 345 aa7.15□□□□□ -1.26
PDPN-212ENST00000621990 CSMD2Q7Z408 3487 aa7.15□□□□□ -1.27
PDPN-212ENST00000621990 NUDT3O95989 172 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 OR10J6PQ8NGY7 276 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 ZMAT4Q9H898 229 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 MAP1AP78559 2803 aaPredicted RBP7.14□□□□□ -1.27
PDPN-212ENST00000621990 PF4V1P10720 104 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 GATA1P15976 413 aaPredicted RBP7.14□□□□□ -1.27
PDPN-212ENST00000621990 LEPP41159 167 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 BOD1L2Q8IYS8 172 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 DAZ1Q9NQZ3 744 aaKnown RBP7.14□□□□□ -1.27
PDPN-212ENST00000621990 TRAV21A0A0B4J279 112 aa7.14□□□□□ -1.27
PDPN-212ENST00000621990 K7EMT4 169 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms