RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 FAM240BA0A1B0GVZ2 78 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 OR10J4P0C629 311 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 PVALBP20472 110 aaPredicted RBP7.85□□□□□ -1.15
CPNE3-210ENST00000621245 IFITM3Q01628 133 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 LRRC37A5PQ49AS3 106 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 OR5C1Q8NGR4 320 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 FXYD5Q96DB9 178 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 ZNF503Q96F45 646 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 CCDC32Q9BV29 185 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 FUT9Q9Y231 359 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 TIMM9Q9Y5J7 89 aa7.85□□□□□ -1.15
CPNE3-210ENST00000621245 SPINK4O60575 86 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 CDK2AP2O75956 126 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 CRISP2P16562 243 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 LINC00315P59091 139 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 HBG1P69891 147 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 HBG2P69892 147 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 Q6ZRN7 208 aaPredicted RBP7.84□□□□□ -1.15
CPNE3-210ENST00000621245 C9orf47Q6ZRZ4 202 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 EIF4E3Q8N5X7 224 aaKnown RBP7.84□□□□□ -1.15
CPNE3-210ENST00000621245 LINC00467Q9BRT7 94 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 TNFRSF18Q9Y5U5 241 aa7.84□□□□□ -1.15
CPNE3-210ENST00000621245 TRGV2A0A075B6R0 118 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 A0A087WWL8 130 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 H3BNG1 76 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 TCL1AP56279 114 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 ASAH1Q13510 395 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 PDE6HQ13956 83 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 ATP6V1FQ16864 119 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 RNF151Q2KHN1 245 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 ANXA2RQ3ZCQ2 193 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 ZNF680Q8NEM1 530 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 LINC00477Q96M19 166 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 PRELID1Q9Y255 219 aa7.83□□□□□ -1.16
CPNE3-210ENST00000621245 MPDU1O75352 247 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 GPX1P07203 203 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 NBEAP1P0C6P0 100 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 H2BFSP57053 126 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 TTC32Q5I0X7 151 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 MUC21Q5SSG8 566 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 C18orf15Q96N68 181 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 WDR61Q9GZS3 305 aaKnown RBP7.82□□□□□ -1.16
CPNE3-210ENST00000621245 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
CPNE3-210ENST00000621245 IGHV1OR15-1A0A075B7D0 117 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 NXPH4O95158 308 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 FHL2Q14192 279 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 ST6GAL2Q96JF0 529 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 C8orf49Q96NF6 230 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 PAXXQ9BUH6 204 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 OR51M1Q9H341 326 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 AAMDCQ9H7C9 122 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
CPNE3-210ENST00000621245 FAT3Q8TDW7 4589 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 E5RGE8 158 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 SFTA3P0C7M3 94 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 ZNF138P52744 262 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 CRYBA4P53673 196 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 IBA57Q5T440 356 aaKnown RBP7.8□□□□□ -1.16
CPNE3-210ENST00000621245 TMEM78Q5T7P6 136 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 MZT2BQ6NZ67 158 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 NMES1Q9C002 83 aa7.8□□□□□ -1.16
CPNE3-210ENST00000621245 A0A1W2PPQ1 181 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 PAX4O43316 350 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 OR7C2O60412 319 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 PRAF2O60831 178 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 UPK1BO75841 260 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 DNAH10OSP0CZ25 163 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 BTF3P20290 206 aaKnown RBP7.79□□□□□ -1.16
CPNE3-210ENST00000621245 RANP62826 216 aaKnown RBP7.79□□□□□ -1.16
CPNE3-210ENST00000621245 Q8N1X5 172 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 ENKURQ8TC29 256 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 ZNF479Q96JC4 524 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 SMIM3Q9BZL3 60 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 WFDC1Q9HC57 220 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 SCRT2Q9NQ03 307 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 NDUFA13Q9P0J0 144 aa7.79□□□□□ -1.16
CPNE3-210ENST00000621245 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
CPNE3-210ENST00000621245 B5MCH6 92 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 SIVA1O15304 175 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 NMBP08949 121 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 PTTG1IPP53801 180 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 UBE2L3P68036 154 aaKnown RBP7.78□□□□□ -1.16
CPNE3-210ENST00000621245 ZNF415Q09FC8 603 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 ZNF266Q14584 549 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 FFAR4Q5NUL3 377 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 WFDC10BQ8IUB3 73 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 PPP1R1CQ8WVI7 109 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 ATP5SQ99766 215 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 MRPL32Q9BYC8 188 aaKnown RBP7.78□□□□□ -1.16
CPNE3-210ENST00000621245 SLC25A31Q9H0C2 315 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 ICOSQ9Y6W8 199 aa7.78□□□□□ -1.16
CPNE3-210ENST00000621245 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 DIRC3C9JPN6 131 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 TNFRSF6BO95407 300 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 TMEM183BQ1AE95 376 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 LYPD5Q6UWN5 251 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 TMEM183AQ8IXX5 376 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 TVP23CQ96ET8 276 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms