RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 TMEM75Q8N9X5 138 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 TMEM167AQ8TBQ9 72 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 TLN2Q9Y4G6 2542 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 IGHV3-64A0A075B6Q5 118 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 PAX2Q02962 417 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 C3orf36Q3SXR2 165 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 CD300EQ496F6 205 aaPredicted RBP5.5□□□□□ -1.53
NEDD9-216ENST00000620854 SEM1Q6ZVN7 128 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 SYT8Q8NBV8 401 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 MSRB1Q9NZV6 116 aa5.5□□□□□ -1.53
NEDD9-216ENST00000620854 RAI1Q7Z5J4 1906 aaPredicted RBP5.5□□□□□ -1.53
NEDD9-216ENST00000620854 TMEM178BH3BS89 294 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 HAX1O00165 279 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 CRIP1P50238 77 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 SUMO2P61956 95 aaKnown RBP5.49□□□□□ -1.53
NEDD9-216ENST00000620854 ZNF833PQ6ZTB9 187 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 FCN3O75636 299 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 GAS8-AS1O95177 125 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 IGHV1-8P0DP01 117 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 EFNA4P52798 201 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 SEC11AP67812 179 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 C19orf54Q5BKX5 351 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 IGLV2-23P01705 113 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 NDPQ00604 133 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 TTC32Q5I0X7 151 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 PVRIGQ6DKI7 326 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 TMEM219Q86XT9 240 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 PIP4P2Q8N4L2 257 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 MRAP2Q96G30 205 aa5.49□□□□□ -1.53
NEDD9-216ENST00000620854 A0A096LNJ9 63 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 TEX48A0A1B0GUV7 120 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 DPM2O94777 84 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 IGLV2-11P01706 119 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 AMTNQ6UX39 209 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 ZNF479Q96JC4 524 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 CD7P09564 240 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 GATA1P15976 413 aaPredicted RBP5.48□□□□□ -1.53
NEDD9-216ENST00000620854 PSG3Q16557 428 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 SAMD5Q5TGI4 173 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 TEX29Q8N6K0 151 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 THAP8Q8NA92 274 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 CELSR1Q9NYQ6 3014 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 IGKV2D-26A0A0A0MRZ7 120 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 IGHV1-3A0A0C4DH29 117 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 A0A1B0GW15 77 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 G3V4G9 280 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 SMAD7O15105 426 aaKnown RBP5.48□□□□□ -1.53
NEDD9-216ENST00000620854 NPYP01303 97 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 FXYD2P54710 66 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 C15orf32Q32M92 178 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 ZC2HC1BQ5TFG8 222 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 SAMD13Q5VXD3 122 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 Q8NA96 180 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 FGF6P10767 208 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 SIGLEC9Q9Y336 463 aa5.48□□□□□ -1.53
NEDD9-216ENST00000620854 ZNF815PA8K554 130 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 H3BRM9 83 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 K7EP34 96 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 HLA-DMBP28068 263 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 SNRPD3P62318 126 aaKnown RBP5.47□□□□□ -1.53
NEDD9-216ENST00000620854 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
NEDD9-216ENST00000620854 SH2D6Q7Z4S9 175 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 OR4X2Q8NGF9 303 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 TRGV9Q99603 122 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 NXT2Q9NPJ8 142 aaKnown RBP5.47□□□□□ -1.53
NEDD9-216ENST00000620854 ZNF492Q9P255 531 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 A0A1W2PPM0 123 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 PPP1R17O96001 155 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 IGKCP01834 107 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 HSD52Q0P140 79 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 CT83Q5H943 113 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 DUX5Q96PT3 197 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 GFRA4Q9GZZ7 299 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 TOMM7Q9P0U1 55 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 HIVEP3Q5T1R4 2406 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 TRAV12-3A0A0B4J271 114 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 A0A1B0GV72 72 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 IGKV1-17P01599 117 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 OR13C6PQ8NH95 151 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 CTSZQ9UBR2 303 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 NAV2Q8IVL1 2488 aa5.47□□□□□ -1.53
NEDD9-216ENST00000620854 ZFYVE26Q68DK2 2539 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 IGLV3-9A0A075B6K5 115 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 TRAV8-2A0A0B4J237 113 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 NDUFS7O75251 213 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 WFDC2Q14508 124 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 UFSP1Q6NVU6 142 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 BOD1L2Q8IYS8 172 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 NPFFR1Q9GZQ6 430 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 TNFRSF18Q9Y5U5 241 aa5.46□□□□□ -1.53
NEDD9-216ENST00000620854 TRBV19A0A075B6N1 114 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 TRAV2A0A0B4J234 112 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 SPRY2O43597 315 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 SH2D1AO60880 128 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 GRNP28799 593 aaKnown RBP5.46□□□□□ -1.54
NEDD9-216ENST00000620854 ETDBQ3ZM63 59 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 C11orf44Q8N8P7 122 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms