RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 LINC00482Q8N8I6 264 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 OR2D3Q8NGH3 330 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 RAX2Q96IS3 184 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 KLF5Q13887 457 aaPredicted RBP16.36■□□□□ 0.21
SGMS1-210ENST00000619438 TGP01266 2768 aa16.35■□□□□ 0.21
SGMS1-210ENST00000619438 F2Z2F3 143 aa16.35■□□□□ 0.21
SGMS1-210ENST00000619438 SAPCD1Q5SSQ6 148 aa16.35■□□□□ 0.21
SGMS1-210ENST00000619438 OR11H1Q8NG94 326 aa16.35■□□□□ 0.21
SGMS1-210ENST00000619438 U3KQE9 123 aa16.35■□□□□ 0.21
SGMS1-210ENST00000619438 MYOZ3Q8TDC0 251 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 CHEK1O14757 476 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 APOHP02749 345 aaPredicted RBP16.34■□□□□ 0.21
SGMS1-210ENST00000619438 TRGV3P03979 118 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 CRIP1P50238 77 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 Q6AWC8 147 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 DPF1Q92782 380 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 KCNS1Q96KK3 526 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 PGLYRP4Q96LB8 373 aa16.34■□□□□ 0.21
SGMS1-210ENST00000619438 GPX1P07203 203 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 CT45A10P0DMU9 189 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 CAMPP49913 170 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 BEAN1Q3B7T3 259 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 OR1N2Q8NGR9 330 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 C18orf32Q8TCD1 76 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 METTL26Q96S19 204 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 SLC50A1Q9BRV3 221 aa16.33■□□□□ 0.2
SGMS1-210ENST00000619438 ALKBH7Q9BT30 221 aaPredicted RBP16.33■□□□□ 0.2
SGMS1-210ENST00000619438 IGHV3-35A0A0C4DH35 117 aa16.32■□□□□ 0.2
SGMS1-210ENST00000619438 TSTD3H0UI37 97 aa16.32■□□□□ 0.2
SGMS1-210ENST00000619438 Q6ZWC4 215 aa16.32■□□□□ 0.2
SGMS1-210ENST00000619438 GATD1Q8NB37 220 aa16.32■□□□□ 0.2
SGMS1-210ENST00000619438 USMG5Q96IX5 58 aa16.32■□□□□ 0.2
SGMS1-210ENST00000619438 MCRIP2Q9BUT9 160 aaKnown RBP16.32■□□□□ 0.2
SGMS1-210ENST00000619438 A0A1B0GW15 77 aa16.31■□□□□ 0.2
SGMS1-210ENST00000619438 SAMD10Q9BYL1 202 aa16.31■□□□□ 0.2
SGMS1-210ENST00000619438 A0A1W2PS18 150 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 RBAKDNA6NC62 111 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 IGHV3-11P01762 117 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 MRPL53Q96EL3 112 aaKnown RBP16.3■□□□□ 0.2
SGMS1-210ENST00000619438 RCHY1Q96PM5 261 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 PRR25Q96S07 402 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 NAGKQ9UJ70 344 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 LCN12Q6JVE5 192 aa16.3■□□□□ 0.2
SGMS1-210ENST00000619438 IGHV3OR16-8A0A075B7F1 116 aa16.29■□□□□ 0.2
SGMS1-210ENST00000619438 IGKV2-40A0A087WW87 121 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-210ENST00000619438 A0A0G2JLM5 398 aa16.29■□□□□ 0.2
SGMS1-210ENST00000619438 ZNF324O75467 553 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-210ENST00000619438 IGKV2D-40P01614 121 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-210ENST00000619438 PRB2P02812 416 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-210ENST00000619438 FAM162BQ5T6X4 162 aa16.29■□□□□ 0.2
SGMS1-210ENST00000619438 KPRPQ5T749 579 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-210ENST00000619438 C8orf49Q96NF6 230 aa16.29■□□□□ 0.2
SGMS1-210ENST00000619438 SSBP4Q9BWG4 385 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-210ENST00000619438 A0A1B0GUT8 65 aa16.28■□□□□ 0.2
SGMS1-210ENST00000619438 SCGB1D1O95968 90 aa16.28■□□□□ 0.2
SGMS1-210ENST00000619438 LGALS1P09382 135 aaKnown RBP16.27■□□□□ 0.2
SGMS1-210ENST00000619438 RIGQ13278 110 aa16.27■□□□□ 0.2
SGMS1-210ENST00000619438 ZNF664Q8N3J9 261 aa16.27■□□□□ 0.2
SGMS1-210ENST00000619438 CLEC5AQ9NY25 188 aa16.27■□□□□ 0.2
SGMS1-210ENST00000619438 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.27■□□□□ 0.19
SGMS1-210ENST00000619438 SH2D1AO60880 128 aa16.27■□□□□ 0.19
SGMS1-210ENST00000619438 DMRTA1Q5VZB9 504 aa16.27■□□□□ 0.19
SGMS1-210ENST00000619438 NDFIP1Q9BT67 221 aa16.27■□□□□ 0.19
SGMS1-210ENST00000619438 LINC01619G3V211 115 aa16.26■□□□□ 0.19
SGMS1-210ENST00000619438 NDUFA4O00483 81 aa16.26■□□□□ 0.19
SGMS1-210ENST00000619438 BMI1P35226 326 aa16.26■□□□□ 0.19
SGMS1-210ENST00000619438 ARL3P36405 182 aa16.26■□□□□ 0.19
SGMS1-210ENST00000619438 FHL3Q13643 280 aa16.26■□□□□ 0.19
SGMS1-210ENST00000619438 PRKDCP78527 4128 aaKnown RBP16.25■□□□□ 0.19
SGMS1-210ENST00000619438 HLA-DMBP28068 263 aa16.25■□□□□ 0.19
SGMS1-210ENST00000619438 HOXD3P31249 432 aaPredicted RBP16.25■□□□□ 0.19
SGMS1-210ENST00000619438 AMTP48728 403 aa16.25■□□□□ 0.19
SGMS1-210ENST00000619438 RPS20P60866 119 aaKnown RBP16.25■□□□□ 0.19
SGMS1-210ENST00000619438 ASCL2Q99929 193 aa16.25■□□□□ 0.19
SGMS1-210ENST00000619438 VGLL1Q99990 258 aa16.25■□□□□ 0.19
SGMS1-210ENST00000619438 LOC102724200A0A096LPH7 203 aaPredicted RBP16.24■□□□□ 0.19
SGMS1-210ENST00000619438 TMEM189A5PLL7 270 aa16.24■□□□□ 0.19
SGMS1-210ENST00000619438 DDTP30046 118 aa16.24■□□□□ 0.19
SGMS1-210ENST00000619438 REC114Q7Z4M0 266 aa16.24■□□□□ 0.19
SGMS1-210ENST00000619438 NRN1Q9NPD7 142 aa16.24■□□□□ 0.19
SGMS1-210ENST00000619438 GLMPQ8WWB7 406 aa16.24■□□□□ 0.19
SGMS1-210ENST00000619438 PRO1933Q9H354 126 aa16.24■□□□□ 0.19
SGMS1-210ENST00000619438 IGHV4OR15-8A0A075B7B6 117 aa16.23■□□□□ 0.19
SGMS1-210ENST00000619438 A0A087WW49 117 aa16.23■□□□□ 0.19
SGMS1-210ENST00000619438 ZNF705FA8MVS1 300 aaPredicted RBP16.23■□□□□ 0.19
SGMS1-210ENST00000619438 ARMS2P0C7Q2 107 aa16.23■□□□□ 0.19
SGMS1-210ENST00000619438 IGFL4Q6B9Z1 124 aa16.23■□□□□ 0.19
SGMS1-210ENST00000619438 TEX43Q6ZNM6 134 aa16.23■□□□□ 0.19
SGMS1-210ENST00000619438 TRAV8-2A0A0B4J237 113 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 SLURP1P55000 103 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 C9orf66Q5T8R8 295 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 ZNF493Q6ZR52 646 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 NIT1Q86X76 327 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 BORCS7Q96B45 105 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 PPP1R14DQ9NXH3 145 aa16.22■□□□□ 0.19
SGMS1-210ENST00000619438 OVOL1O14753 267 aa16.21■□□□□ 0.19
SGMS1-210ENST00000619438 DLX4Q92988 240 aaPredicted RBP16.21■□□□□ 0.19
SGMS1-210ENST00000619438 ZMAT5Q9UDW3 170 aaKnown RBP16.21■□□□□ 0.19
SGMS1-210ENST00000619438 IGHV3-66A0A0C4DH42 116 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms