RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TP53TG3Q9ULZ0 132 aa5.85□□□□□ -1.47
NEK3-209ENST00000618856 DEFB131BA0A096LNP1 70 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 UMAD1C9J7I0 102 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 C1QBP02746 253 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 TCRAP04437 139 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 EMP1P54849 157 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
NEK3-209ENST00000618856 BTN1A1Q13410 526 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 FAM74A1Q5RGS3 127 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 Q6AWC8 147 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 LGALS9CQ6DKI2 356 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 Q6ZQT7 251 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 ZNF767PQ75MW2 155 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 CCDC28AQ8IWP9 274 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 C5orf17Q8NAS9 161 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 Q8TAT8 98 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 MBD3L1Q8WWY6 194 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 TVP23CQ96ET8 276 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 C18orf15Q96N68 181 aa5.84□□□□□ -1.47
NEK3-209ENST00000618856 KANTRA0A1W2PQU2 76 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 FAM74A7A6NL05 159 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 GPX1P07203 203 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 RNASE4P34096 147 aaKnown RBP5.83□□□□□ -1.48
NEK3-209ENST00000618856 FHITP49789 147 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 TDRG1Q3Y452 100 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 AKR1C8PQ5T2L2 129 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 IBA57Q5T440 356 aaKnown RBP5.83□□□□□ -1.48
NEK3-209ENST00000618856 DPPA3Q6W0C5 159 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 GOLT1AQ6ZVE7 132 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 EIF4E3Q8N5X7 224 aaKnown RBP5.83□□□□□ -1.48
NEK3-209ENST00000618856 CMTM2Q8TAZ6 248 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 HYLS1Q96M11 299 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 TMPRSS5Q9H3S3 457 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 EPDR1Q9UM22 224 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 TIMM8BQ9Y5J9 83 aaPredicted RBP5.83□□□□□ -1.48
NEK3-209ENST00000618856 ARL2-SNX15V9GYD0 113 aa5.83□□□□□ -1.48
NEK3-209ENST00000618856 HECTD4Q9Y4D8 3996 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 IGHV4-4A0A075B6R2 117 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 IGHV1OR15-1A0A075B7D0 117 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 TRAV8-1A0A0A6YYK1 113 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 MAP1LC3B2A6NCE7 125 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 FBLL1A6NHQ2 334 aaKnown RBP5.82□□□□□ -1.48
NEK3-209ENST00000618856 CBY3A6NI87 242 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 IGLL5B9A064 214 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 SUMO1P63165 101 aaKnown RBP5.82□□□□□ -1.48
NEK3-209ENST00000618856 GNG5P63218 68 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 EIF5AP63241 154 aaKnown RBP5.82□□□□□ -1.48
NEK3-209ENST00000618856 COX8CQ7Z4L0 72 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 TMEM75Q8N9X5 138 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 ZNF680Q8NEM1 530 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 ATG101Q9BSB4 218 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 ZNF471Q9BX82 626 aaPredicted RBP5.82□□□□□ -1.48
NEK3-209ENST00000618856 NKX6-2Q9C056 277 aaPredicted RBP5.82□□□□□ -1.48
NEK3-209ENST00000618856 MAP1LC3BQ9GZQ8 125 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 BIRC6Q9NR09 4857 aa5.82□□□□□ -1.48
NEK3-209ENST00000618856 TRAV1-1A0A0B4J248 108 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 J3KRW8 73 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 SPINK4O60575 86 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 TPT1P13693 172 aaKnown RBP5.81□□□□□ -1.48
NEK3-209ENST00000618856 FGF8P55075 233 aaPredicted RBP5.81□□□□□ -1.48
NEK3-209ENST00000618856 TCL1AP56279 114 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 DAD1P61803 113 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 AKAP14Q86UN6 197 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 C9orf62Q8N4C0 152 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 CYB561D1Q8N8Q1 229 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 HIST1H2BAQ96A08 127 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 TCEAL7Q9BRU2 100 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 NOP10Q9NPE3 64 aaKnown RBP5.81□□□□□ -1.48
NEK3-209ENST00000618856 KLF12Q9Y4X4 402 aa5.81□□□□□ -1.48
NEK3-209ENST00000618856 PKD1P98161 4303 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 DNAH11Q96DT5 4516 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 TRBV6-1A0A0K0K1D8 114 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 PFDN1O60925 122 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 HTN1P15515 57 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 RAB5CP51148 216 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 ZNF80P51504 273 aaPredicted RBP5.8□□□□□ -1.48
NEK3-209ENST00000618856 LGALS9BQ3B8N2 356 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 SLC51BQ86UW2 128 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 NDUFAF3Q9BU61 184 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 TREM1Q9NP99 234 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 GSN-AS1Q9NRJ2 163 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 PSG8Q9UQ74 426 aa5.8□□□□□ -1.48
NEK3-209ENST00000618856 TRAV21A0A0B4J279 112 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 A0A1B0GVG6 124 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 SNURFLB1AK76 121 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 K7EQM0 130 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 PEX7O00628 323 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 ATP5G1P05496 136 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 DEFB130BP0DP73 79 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 DEFB130AP0DP74 79 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 ATP5G3P48201 142 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 SULT1A2P50226 295 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 FLI1Q01543 452 aaPredicted RBP5.79□□□□□ -1.48
NEK3-209ENST00000618856 SAPCD1Q5SSQ6 148 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 TMEM88Q6PEY1 159 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 Q6ZTI0 123 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 FAM213BQ8TBF2 198 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 LINC00479Q96M42 142 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 C11orf21Q9P2W6 132 aa5.79□□□□□ -1.48
NEK3-209ENST00000618856 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms