RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 RPL11P62913 178 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 TMEM88Q6PEY1 159 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 RBPMS2Q6ZRY4 209 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 TMEM75Q8N9X5 138 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 ISOC2Q96AB3 205 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 MRPL53Q96EL3 112 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 ZNF331Q9NQX6 463 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 ZFP30Q9Y2G7 519 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 KLF12Q9Y4X4 402 aa12.84□□□□□ -0.35
TRAPPC3-209ENST00000616395 IGHV3-49A0A0A0MS15 119 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 TRAV25A0A0B4J276 109 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 MGST1P10620 155 aaKnown RBP12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 ID1P41134 155 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 RNF212Q495C1 297 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 CBLN2Q8IUK8 224 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 OR10G8Q8NGN5 311 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 OCC1Q8TAD7 63 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 SFRP2Q96HF1 295 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 NDFIP1Q9BT67 221 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 RHPN1-AS1Q9BWJ2 59 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 MAP6D1Q9H9H5 199 aa12.83□□□□□ -0.36
TRAPPC3-209ENST00000616395 ERVFC1-1P60608 527 aa12.82□□□□□ -0.36
TRAPPC3-209ENST00000616395 GNG5P63218 68 aa12.82□□□□□ -0.36
TRAPPC3-209ENST00000616395 GOLT1AQ6ZVE7 132 aa12.82□□□□□ -0.36
TRAPPC3-209ENST00000616395 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
TRAPPC3-209ENST00000616395 DAZAP1Q96EP5 407 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-209ENST00000616395 IGHV3-66A0A0C4DH42 116 aa12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 DIRC3C9JPN6 131 aa12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 PAFAH1B2P68402 229 aa12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 C11orf68Q9H3H3 251 aaKnown RBP12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 NRN1Q9NPD7 142 aa12.81□□□□□ -0.36
TRAPPC3-209ENST00000616395 IGHV3OR16-13A0A075B7E8 117 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 IGHV3-74A0A0B4J1X5 117 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 RBAKDNA6NC62 111 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 CHEK1O14757 476 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 DEFB4AO15263 64 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 FLI1Q01543 452 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 PSG3Q16557 428 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 ODF3L2Q3SX64 289 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 IGF2BP2-AS1Q96M15 143 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 C17orf77Q96MU5 243 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 OSTCQ9NRP0 149 aa12.8□□□□□ -0.36
TRAPPC3-209ENST00000616395 SLC17A3O00476 420 aa12.79□□□□□ -0.36
TRAPPC3-209ENST00000616395 ISLRO14498 428 aa12.79□□□□□ -0.36
TRAPPC3-209ENST00000616395 GCGP01275 180 aa12.79□□□□□ -0.36
TRAPPC3-209ENST00000616395 APOHP02749 345 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC3-209ENST00000616395 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
TRAPPC3-209ENST00000616395 SPAG8Q99932 426 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC3-209ENST00000616395 TRBV20OR9-2A0A075B6H5 130 aa12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 M0R2N4 97 aa12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 IBA57Q5T440 356 aaKnown RBP12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 PRNTQ86SH4 94 aa12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
TRAPPC3-209ENST00000616395 LTAP01374 205 aa12.77□□□□□ -0.37
TRAPPC3-209ENST00000616395 FAM231DQ6ZW35 169 aa12.77□□□□□ -0.37
TRAPPC3-209ENST00000616395 Q86TA4 180 aa12.77□□□□□ -0.37
TRAPPC3-209ENST00000616395 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
TRAPPC3-209ENST00000616395 PSG8Q9UQ74 426 aa12.77□□□□□ -0.37
TRAPPC3-209ENST00000616395 TRAV9-1A0A075B6T8 112 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 PGPEP1LA6NFU8 196 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 GATCO43716 136 aaKnown RBP12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 FAM24BQ8N5W8 94 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 OR10J6PQ8NGY7 276 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 CSTL1Q9H114 145 aa12.76□□□□□ -0.37
TRAPPC3-209ENST00000616395 IGKV3-7A0A075B6H7 116 aa12.75□□□□□ -0.37
TRAPPC3-209ENST00000616395 SNRPD3P62318 126 aaKnown RBP12.75□□□□□ -0.37
TRAPPC3-209ENST00000616395 GBGT1Q8N5D6 347 aa12.75□□□□□ -0.37
TRAPPC3-209ENST00000616395 ZNF738Q8NE65 137 aa12.75□□□□□ -0.37
TRAPPC3-209ENST00000616395 LINC00479Q96M42 142 aa12.75□□□□□ -0.37
TRAPPC3-209ENST00000616395 ZNF492Q9P255 531 aa12.75□□□□□ -0.37
TRAPPC3-209ENST00000616395 IGHV4-4A0A075B6R2 117 aa12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 ZNF705GA8MUZ8 300 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 M0R3E3 92 aa12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 APRG1Q8IVJ8 170 aa12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 OR4B1Q8NGF8 309 aa12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 URGCP-MRPS24S4R325 110 aa12.74□□□□□ -0.37
TRAPPC3-209ENST00000616395 XKRY2A2RUG3 117 aa12.73□□□□□ -0.37
TRAPPC3-209ENST00000616395 K7EN84 100 aa12.73□□□□□ -0.37
TRAPPC3-209ENST00000616395 P01737 135 aa12.73□□□□□ -0.37
TRAPPC3-209ENST00000616395 TFPI2P48307 235 aa12.73□□□□□ -0.37
TRAPPC3-209ENST00000616395 IL36BQ9NZH7 164 aa12.73□□□□□ -0.37
TRAPPC3-209ENST00000616395 TRBV24-1A0A075B6N3 115 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 COLCA2A8K830 154 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 RAB5AP20339 215 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 OR5I1Q13606 314 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 ELOBQ15370 118 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 ZNF124Q15973 351 aa12.72□□□□□ -0.37
TRAPPC3-209ENST00000616395 POM121L12Q8N7R1 296 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms