RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 A0A0D9SG52 128 aa13.6□□□□□ -0.23
SRSF4-206ENST00000605204 K7EQM0 130 aa13.6□□□□□ -0.23
SRSF4-206ENST00000605204 EIF3GO75821 320 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRSF4-206ENST00000605204 IBA57Q5T440 356 aaKnown RBP13.6□□□□□ -0.23
SRSF4-206ENST00000605204 LINC00612Q8N6U2 182 aa13.6□□□□□ -0.23
SRSF4-206ENST00000605204 C15orf53Q8NAA6 179 aa13.6□□□□□ -0.23
SRSF4-206ENST00000605204 FBLL1A6NHQ2 334 aaKnown RBP13.59□□□□□ -0.23
SRSF4-206ENST00000605204 RGS13O14921 159 aa13.59□□□□□ -0.23
SRSF4-206ENST00000605204 CYTL1Q9NRR1 136 aa13.59□□□□□ -0.23
SRSF4-206ENST00000605204 PLA2G2EQ9NZK7 142 aa13.59□□□□□ -0.23
SRSF4-206ENST00000605204 SMLR1H3BR10 107 aa13.58□□□□□ -0.23
SRSF4-206ENST00000605204 EIF5AP63241 154 aaKnown RBP13.58□□□□□ -0.23
SRSF4-206ENST00000605204 GOLT1AQ6ZVE7 132 aa13.58□□□□□ -0.23
SRSF4-206ENST00000605204 NDFIP1Q9BT67 221 aa13.58□□□□□ -0.23
SRSF4-206ENST00000605204 KIAA1109Q2LD37 5005 aa13.58□□□□□ -0.24
SRSF4-206ENST00000605204 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
SRSF4-206ENST00000605204 KANTRA0A1W2PQU2 76 aa13.58□□□□□ -0.24
SRSF4-206ENST00000605204 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
SRSF4-206ENST00000605204 Q6AWC8 147 aa13.58□□□□□ -0.24
SRSF4-206ENST00000605204 NKX6-2Q9C056 277 aaPredicted RBP13.58□□□□□ -0.24
SRSF4-206ENST00000605204 RPH3ALQ9UNE2 315 aa13.58□□□□□ -0.24
SRSF4-206ENST00000605204 UMAD1C9J7I0 102 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 TCL1AP56279 114 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 PRR9Q5T870 116 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 TMEM88Q6PEY1 159 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 IQCF2Q8IXL9 164 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 C11orf72Q8NBR9 251 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 C18orf15Q96N68 181 aa13.57□□□□□ -0.24
SRSF4-206ENST00000605204 F5H768 121 aa13.56□□□□□ -0.24
SRSF4-206ENST00000605204 BCL2L11O43521 198 aa13.56□□□□□ -0.24
SRSF4-206ENST00000605204 TCRAP04437 139 aa13.56□□□□□ -0.24
SRSF4-206ENST00000605204 SEC11BP0C7V7 166 aa13.56□□□□□ -0.24
SRSF4-206ENST00000605204 STOML3Q8TAV4 291 aa13.56□□□□□ -0.24
SRSF4-206ENST00000605204 GGTLC3B5MD39 225 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 ZNF415Q09FC8 603 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 ZNF726P1Q15940 193 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 CYB561D1Q8N8Q1 229 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 OR11H4Q8NGC9 324 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 ATG101Q9BSB4 218 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 GSN-AS1Q9NRJ2 163 aa13.55□□□□□ -0.24
SRSF4-206ENST00000605204 TRAV21A0A0B4J279 112 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 SUMO1P63165 101 aaKnown RBP13.54□□□□□ -0.24
SRSF4-206ENST00000605204 LGALS9BQ3B8N2 356 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 SSX7Q7RTT5 188 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 POM121L12Q8N7R1 296 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 TCEAL7Q9BRU2 100 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 ZNF471Q9BX82 626 aaPredicted RBP13.54□□□□□ -0.24
SRSF4-206ENST00000605204 TREM1Q9NP99 234 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 EPDR1Q9UM22 224 aa13.54□□□□□ -0.24
SRSF4-206ENST00000605204 TRGV11A0A075B6L2 103 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 GAGE12BA1L429 117 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 MAP1LC3B2A6NCE7 125 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 GAGE7O76087 117 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 GAGE12FP0CL80 117 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 GAGE12GP0CL81 117 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 GAGE12IP0CL82 117 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 GNG5P63218 68 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 TDRG1Q3Y452 100 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 RNF212Q495C1 297 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 TCTE3Q8IZS6 198 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 TMEM75Q8N9X5 138 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 MAP1LC3BQ9GZQ8 125 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 ARL2-SNX15V9GYD0 113 aa13.53□□□□□ -0.24
SRSF4-206ENST00000605204 PFDN1O60925 122 aa13.52□□□□□ -0.25
SRSF4-206ENST00000605204 FAM3BP58499 235 aaPredicted RBP13.52□□□□□ -0.25
SRSF4-206ENST00000605204 ZFP69Q49AA0 526 aa13.52□□□□□ -0.25
SRSF4-206ENST00000605204 DPPA3Q6W0C5 159 aa13.52□□□□□ -0.25
SRSF4-206ENST00000605204 KLF12Q9Y4X4 402 aa13.52□□□□□ -0.25
SRSF4-206ENST00000605204 TRGV2A0A075B6R0 118 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 TRAV8-1A0A0A6YYK1 113 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 SPINK4O60575 86 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 TPT1P13693 172 aaKnown RBP13.51□□□□□ -0.25
SRSF4-206ENST00000605204 PPT1P50897 306 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 Q6ZTI0 123 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 TP53TG3Q9ULZ0 132 aa13.51□□□□□ -0.25
SRSF4-206ENST00000605204 TRGV1A0A0A0MS02 117 aa13.5□□□□□ -0.25
SRSF4-206ENST00000605204 H3BNG1 76 aa13.5□□□□□ -0.25
SRSF4-206ENST00000605204 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-206ENST00000605204 Q6ZNX1 250 aa13.5□□□□□ -0.25
SRSF4-206ENST00000605204 HIST1H2BAQ96A08 127 aa13.5□□□□□ -0.25
SRSF4-206ENST00000605204 KCNS1Q96KK3 526 aa13.5□□□□□ -0.25
SRSF4-206ENST00000605204 FAT2Q9NYQ8 4349 aa13.5□□□□□ -0.25
SRSF4-206ENST00000605204 IFNA7P01567 189 aa13.49□□□□□ -0.25
SRSF4-206ENST00000605204 FHITP49789 147 aa13.49□□□□□ -0.25
SRSF4-206ENST00000605204 MUC21Q5SSG8 566 aa13.49□□□□□ -0.25
SRSF4-206ENST00000605204 EIF5AL1Q6IS14 154 aaKnown RBP13.49□□□□□ -0.25
SRSF4-206ENST00000605204 SPXQ9BT56 116 aa13.49□□□□□ -0.25
SRSF4-206ENST00000605204 PSG8Q9UQ74 426 aa13.49□□□□□ -0.25
SRSF4-206ENST00000605204 FAM74A7A6NL05 159 aa13.48□□□□□ -0.25
SRSF4-206ENST00000605204 F6UZH7 168 aa13.48□□□□□ -0.25
SRSF4-206ENST00000605204 TMUB2Q71RG4 321 aa13.48□□□□□ -0.25
SRSF4-206ENST00000605204 IGLV2-11P01706 119 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 FGF8P55075 233 aaPredicted RBP13.47□□□□□ -0.25
SRSF4-206ENST00000605204 OR5I1Q13606 314 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 SMUG1Q53HV7 270 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 TVP23CQ96ET8 276 aa13.47□□□□□ -0.25
SRSF4-206ENST00000605204 TMPRSS5Q9H3S3 457 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms