RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 SEC11BP0C7V7 166 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 TPT1P13693 172 aaKnown RBP9.11□□□□□ -0.95
USE1-209ENST00000601592 FHITP49789 147 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 EIF4E3Q8N5X7 224 aaKnown RBP9.11□□□□□ -0.95
USE1-209ENST00000601592 ARL6IP6Q8N6S5 226 aa9.11□□□□□ -0.95
USE1-209ENST00000601592 TRBV7-9A0A0J9YWB2 115 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 A0A1B0GV50 99 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 UMAD1C9J7I0 102 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 F6UZH7 168 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
USE1-209ENST00000601592 TCRAP04437 139 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 LGALSLQ3ZCW2 172 aaPredicted RBP9.1□□□□□ -0.95
USE1-209ENST00000601592 MUC21Q5SSG8 566 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 Q6ZQT7 251 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 NDFIP1Q9BT67 221 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 NAGKQ9UJ70 344 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 LENEPQ9Y5L5 61 aa9.1□□□□□ -0.95
USE1-209ENST00000601592 PLECQ15149 4684 aaKnown RBP9.1□□□□□ -0.95
USE1-209ENST00000601592 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 LYSTQ99698 3801 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 IGHV1OR15-1A0A075B7D0 117 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 SERTM2A0A1B0GWG4 89 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 A0A1W2PRE2 83 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 TCTAP57738 103 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 CYB561D1Q8N8Q1 229 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 ZNF680Q8NEM1 530 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 SFT2D1Q8WV19 159 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 NDUFAF3Q9BU61 184 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 APLNQ9ULZ1 77 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 EPDR1Q9UM22 224 aa9.09□□□□□ -0.95
USE1-209ENST00000601592 GAGE12BA1L429 117 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 FAM74A7A6NL05 159 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 GAGE7O76087 117 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 GAGE12FP0CL80 117 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 GAGE12GP0CL81 117 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 GAGE12IP0CL82 117 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 PRNTQ86SH4 94 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 PSG8Q9UQ74 426 aa9.08□□□□□ -0.96
USE1-209ENST00000601592 A0A1B0GVG6 124 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 F5H768 121 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 PEX7O00628 323 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 ATP5G1P05496 136 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 ATP5G3P48201 142 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 FLI1Q01543 452 aaPredicted RBP9.07□□□□□ -0.96
USE1-209ENST00000601592 ANXA2RQ3ZCQ2 193 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 ZFP69Q49AA0 526 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 EIF5AL1Q6IS14 154 aaKnown RBP9.07□□□□□ -0.96
USE1-209ENST00000601592 TMEM88Q6PEY1 159 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 TVP23CQ96ET8 276 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 NKX6-2Q9C056 277 aaPredicted RBP9.07□□□□□ -0.96
USE1-209ENST00000601592 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
USE1-209ENST00000601592 TRGV1A0A0A0MS02 117 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 TRAV34A0A0B4J273 112 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 PPT1P50897 306 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 TMEM183BQ1AE95 376 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 Q6AWC8 147 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 DPPA3Q6W0C5 159 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 Q6ZTI0 123 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 TMEM183AQ8IXX5 376 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 TMEM75Q8N9X5 138 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 KLF12Q9Y4X4 402 aa9.06□□□□□ -0.96
USE1-209ENST00000601592 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 TRAV21A0A0B4J279 112 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 PAGE4O60829 102 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 TCL1AP56279 114 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
USE1-209ENST00000601592 LGALS9CQ6DKI2 356 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 MBD3L1Q8WWY6 194 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 LINC00479Q96M42 142 aa9.05□□□□□ -0.96
USE1-209ENST00000601592 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 FBLL1A6NHQ2 334 aaKnown RBP9.04□□□□□ -0.96
USE1-209ENST00000601592 GCGP01275 180 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 IGLV2-11P01706 119 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 SMUG1Q53HV7 270 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 IBA57Q5T440 356 aaKnown RBP9.04□□□□□ -0.96
USE1-209ENST00000601592 SLC51BQ86UW2 128 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 C9orf62Q8N4C0 152 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 HIST1H2BAQ96A08 127 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 FAM210BQ96KR6 192 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
USE1-209ENST00000601592 RYR3Q15413 4870 aa9.04□□□□□ -0.96
USE1-209ENST00000601592 AKR1C3P42330 323 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 RAB5CP51148 216 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 UBE2G1P62253 170 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 OR5I1Q13606 314 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 SAPCD1Q5SSQ6 148 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 Q86TA4 180 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 UBE2DNLQ8IWF7 75 aa9.03□□□□□ -0.96
USE1-209ENST00000601592 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms