RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 CBY3A6NI87 242 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 UMAD1C9J7I0 102 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 K7EQM0 130 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 RGS13O14921 159 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 TCRAP04437 139 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 ZNF680Q8NEM1 530 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 STOML3Q8TAV4 291 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 ALMS1Q8TCU4 4167 aa11.95□□□□□ -0.5
TRIM28-215ENST00000601150 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
TRIM28-215ENST00000601150 RYR3Q15413 4870 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 TRAV8-1A0A0A6YYK1 113 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 C1QBP02746 253 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
TRIM28-215ENST00000601150 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 AKAP14Q86UN6 197 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 FAM210BQ96KR6 192 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 NDUFAF3Q9BU61 184 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 EPDR1Q9UM22 224 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 SACSQ9NZJ4 4579 aa11.94□□□□□ -0.5
TRIM28-215ENST00000601150 IGHV1OR15-1A0A075B7D0 117 aa11.93□□□□□ -0.5
TRIM28-215ENST00000601150 FHITP49789 147 aa11.93□□□□□ -0.5
TRIM28-215ENST00000601150 UBE2G2P60604 165 aa11.93□□□□□ -0.5
TRIM28-215ENST00000601150 LGALSLQ3ZCW2 172 aaPredicted RBP11.93□□□□□ -0.5
TRIM28-215ENST00000601150 Q6AWC8 147 aa11.93□□□□□ -0.5
TRIM28-215ENST00000601150 Q6ZQT7 251 aa11.93□□□□□ -0.5
TRIM28-215ENST00000601150 ATP5G1P05496 136 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 ATP5G3P48201 142 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 DAZ2Q13117 558 aaKnown RBP11.92□□□□□ -0.5
TRIM28-215ENST00000601150 DPPA3Q6W0C5 159 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 CYB561D1Q8N8Q1 229 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 C11orf72Q8NBR9 251 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 FAM213BQ8TBF2 198 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 TVP23CQ96ET8 276 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 ATG101Q9BSB4 218 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 NDFIP1Q9BT67 221 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
TRIM28-215ENST00000601150 TREM1Q9NP99 234 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 GSN-AS1Q9NRJ2 163 aa11.92□□□□□ -0.5
TRIM28-215ENST00000601150 FBLL1A6NHQ2 334 aaKnown RBP11.91□□□□□ -0.5
TRIM28-215ENST00000601150 FAM74A7A6NL05 159 aa11.91□□□□□ -0.5
TRIM28-215ENST00000601150 IFNA7P01567 189 aa11.91□□□□□ -0.5
TRIM28-215ENST00000601150 IBA57Q5T440 356 aaKnown RBP11.91□□□□□ -0.5
TRIM28-215ENST00000601150 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
TRIM28-215ENST00000601150 SGK494Q96LW2 274 aa11.91□□□□□ -0.5
TRIM28-215ENST00000601150 TP53TG3Q9ULZ0 132 aa11.91□□□□□ -0.5
TRIM28-215ENST00000601150 PSG8Q9UQ74 426 aa11.91□□□□□ -0.5
TRIM28-215ENST00000601150 DNAH1Q9P2D7 4330 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 RYR2Q92736 4967 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 F6UZH7 168 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 MUC21Q5SSG8 566 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 TMEM75Q8N9X5 138 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 SFT2D1Q8WV19 159 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
TRIM28-215ENST00000601150 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 F5H768 121 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 GAGE7O76087 117 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 GAGE12FP0CL80 117 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 GAGE12GP0CL81 117 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 GAGE12IP0CL82 117 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 TCL1AP56279 114 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 FLI1Q01543 452 aaPredicted RBP11.89□□□□□ -0.51
TRIM28-215ENST00000601150 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
TRIM28-215ENST00000601150 TMEM88Q6PEY1 159 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 FAM159AQ6UWV7 190 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
TRIM28-215ENST00000601150 PEX7O00628 323 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 PPT1P50897 306 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 ZNF415Q09FC8 603 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 Q6ZTI0 123 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 HIST1H2BAQ96A08 127 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 NAGKQ9UJ70 344 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 ARL2-SNX15V9GYD0 113 aa11.88□□□□□ -0.51
TRIM28-215ENST00000601150 H2AFB1P0C5Y9 115 aa11.87□□□□□ -0.51
TRIM28-215ENST00000601150 SAPCD1Q5SSQ6 148 aa11.87□□□□□ -0.51
TRIM28-215ENST00000601150 CST9LP1Q5W188 147 aa11.87□□□□□ -0.51
TRIM28-215ENST00000601150 TRGV11A0A075B6L2 103 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 SPINK4O60575 86 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 P0DMU3 169 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 FAM231AP0DMU4 169 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 FAM231CP0DMU5 169 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 RAB5CP51148 216 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 ZFP69Q49AA0 526 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 SMUG1Q53HV7 270 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 SLC51BQ86UW2 128 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TMEM183AQ8IXX5 376 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 LINC00479Q96M42 142 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
TRIM28-215ENST00000601150 TRGV2A0A075B6R0 118 aa11.85□□□□□ -0.51
TRIM28-215ENST00000601150 A0A1B0GV50 99 aa11.85□□□□□ -0.51
TRIM28-215ENST00000601150 PAGE4O60829 102 aa11.85□□□□□ -0.51
TRIM28-215ENST00000601150 LGALS9BQ3B8N2 356 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms