RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DAZAP1Q96EP5 407 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 PRR25Q96S07 402 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 IL36BQ9NZH7 164 aa13.3□□□□□ -0.28
SHKBP1-224ENST00000600718 M0R143 59 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 C9orf47Q6ZRZ4 202 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 MRPL52Q86TS9 123 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 NDFIP1Q9BT67 221 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 SNHG12Q9BXW3 62 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 AGPAT4-IT1Q9H0P7 198 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 C19orf71A6NCJ1 209 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 K7EQG2 157 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 RAB4AP20338 218 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 NSUN5P1Q3KNT7 163 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 ZC2HC1AQ96GY0 325 aa13.29□□□□□ -0.28
SHKBP1-224ENST00000600718 TMEM78Q5T7P6 136 aa13.28□□□□□ -0.28
SHKBP1-224ENST00000600718 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.28□□□□□ -0.28
SHKBP1-224ENST00000600718 CT45A10P0DMU9 189 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 ZNF138P52744 262 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 OR10J6PQ8NGY7 276 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 DYNLRB2Q8TF09 96 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 LINC00477Q96M19 166 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 C8orf49Q96NF6 230 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 ASCL2Q99929 193 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 SIGLEC8Q9NYZ4 499 aa13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 NSD1Q96L73 2696 aaPredicted RBP13.27□□□□□ -0.28
SHKBP1-224ENST00000600718 P01737 135 aa13.27□□□□□ -0.29
SHKBP1-224ENST00000600718 TFPI2P48307 235 aa13.27□□□□□ -0.29
SHKBP1-224ENST00000600718 SNRPD3P62318 126 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-224ENST00000600718 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.29
SHKBP1-224ENST00000600718 Q8TAT8 98 aa13.27□□□□□ -0.29
SHKBP1-224ENST00000600718 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
SHKBP1-224ENST00000600718 DEFB114Q30KQ6 69 aa13.26□□□□□ -0.29
SHKBP1-224ENST00000600718 RBPMS2Q6ZRY4 209 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-224ENST00000600718 TRAV9-1A0A075B6T8 112 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 OR4B1Q8NGF8 309 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 RPP21Q9H633 154 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 LENEPQ9Y5L5 61 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 NPIPB6E9PJ23 425 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 CRIP1P50238 77 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 CT83Q5H943 113 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 OR8A1Q8NGG7 326 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 NF1P21359 2839 aa13.25□□□□□ -0.29
SHKBP1-224ENST00000600718 SMIM27A0A1W2PRY6 76 aa13.24□□□□□ -0.29
SHKBP1-224ENST00000600718 NAGKQ9UJ70 344 aa13.24□□□□□ -0.29
SHKBP1-224ENST00000600718 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 SCGB1D1O95968 90 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 ZNF688P0C7X2 276 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 FAM162BQ5T6X4 162 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 A8MWL6 223 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 TMEM61Q8N0U2 210 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 TSKUQ8WUA8 353 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 TRAPPC1Q9Y5R8 145 aa13.23□□□□□ -0.29
SHKBP1-224ENST00000600718 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-224ENST00000600718 F8P00451 2351 aa13.22□□□□□ -0.29
SHKBP1-224ENST00000600718 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 CD300EQ496F6 205 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 TRBV7-9A0A0J9YWB2 115 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 F6UB75 175 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 SH2D1AO60880 128 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 DEFB1P60022 68 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 RPL19P84098 196 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 GAGE1Q13065 139 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 OR2D3Q8NGH3 330 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 CBY1Q9Y3M2 126 aa13.21□□□□□ -0.29
SHKBP1-224ENST00000600718 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 G0S2P27469 103 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 ZNF80P51504 273 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 SPAG8Q99932 426 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 GFRA4Q9GZZ7 299 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 ZNF25P17030 456 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 TCL1AP56279 114 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 CITED1Q99966 193 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 NAT8BQ9UHF3 227 aa13.2□□□□□ -0.3
SHKBP1-224ENST00000600718 IZUMO1RA6ND01 250 aa13.19□□□□□ -0.3
SHKBP1-224ENST00000600718 PF4P02776 101 aa13.19□□□□□ -0.3
SHKBP1-224ENST00000600718 EBLN2Q6P2I7 272 aa13.19□□□□□ -0.3
SHKBP1-224ENST00000600718 FAM19A4Q96LR4 140 aa13.19□□□□□ -0.3
SHKBP1-224ENST00000600718 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
SHKBP1-224ENST00000600718 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 DLEU1O43261 78 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 A0A0J9YX75 114 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 TMEM189A5PLL7 270 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 DUSP14O95147 198 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 ESDP10768 282 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 TMEM256Q8N2U0 113 aa13.18□□□□□ -0.3
SHKBP1-224ENST00000600718 SAP30O75446 220 aa13.17□□□□□ -0.3
SHKBP1-224ENST00000600718 TEX43Q6ZNM6 134 aa13.17□□□□□ -0.3
SHKBP1-224ENST00000600718 NUP35Q8NFH5 326 aa13.17□□□□□ -0.3
SHKBP1-224ENST00000600718 HIGD1CA8MV81 97 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 CRISP2P16562 243 aa13.16□□□□□ -0.3
SHKBP1-224ENST00000600718 FOXA3P55318 350 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms