RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 MUC4Q99102 2169 aa11.1□□□□□ -0.63
RPS28-203ENST00000600659 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 TCRAP04437 139 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 DEFB130BP0DP73 79 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 DEFB130AP0DP74 79 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 FGF8P55075 233 aaPredicted RBP11.09□□□□□ -0.63
RPS28-203ENST00000600659 FAM74A1Q5RGS3 127 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 Q6AWC8 147 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
RPS28-203ENST00000600659 C5orf17Q8NAS9 161 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 CMTM2Q8TAZ6 248 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 A0A1W2PRE2 83 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 SEC11BP0C7V7 166 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 HTN3P15516 51 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
RPS28-203ENST00000600659 TMUB2Q71RG4 321 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 GSN-AS1Q9NRJ2 163 aa11.09□□□□□ -0.63
RPS28-203ENST00000600659 IGHV1OR15-1A0A075B7D0 117 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 SUMO1P63165 101 aaKnown RBP11.08□□□□□ -0.64
RPS28-203ENST00000600659 TMEM88Q6PEY1 159 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 CCDC28AQ8IWP9 274 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 FAM210BQ96KR6 192 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 SGK494Q96LW2 274 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 ZNF471Q9BX82 626 aaPredicted RBP11.08□□□□□ -0.64
RPS28-203ENST00000600659 EPDR1Q9UM22 224 aa11.08□□□□□ -0.64
RPS28-203ENST00000600659 KANTRA0A1W2PQU2 76 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 MAP1LC3B2A6NCE7 125 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 CBY3A6NI87 242 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 FAM74A7A6NL05 159 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 TCL1AP56279 114 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 LGALSLQ3ZCW2 172 aaPredicted RBP11.07□□□□□ -0.64
RPS28-203ENST00000600659 IBA57Q5T440 356 aaKnown RBP11.07□□□□□ -0.64
RPS28-203ENST00000600659 Q6ZTI0 123 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 ZNF680Q8NEM1 530 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 STOML3Q8TAV4 291 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 MAP1LC3BQ9GZQ8 125 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
RPS28-203ENST00000600659 SERTM2A0A1B0GWG4 89 aa11.06□□□□□ -0.64
RPS28-203ENST00000600659 SNURFLB1AK76 121 aa11.06□□□□□ -0.64
RPS28-203ENST00000600659 F6UZH7 168 aa11.06□□□□□ -0.64
RPS28-203ENST00000600659 ATP5G1P05496 136 aa11.06□□□□□ -0.64
RPS28-203ENST00000600659 ATP5G3P48201 142 aa11.06□□□□□ -0.64
RPS28-203ENST00000600659 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 RGS13O14921 159 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 GAGE7O76087 117 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 C1QBP02746 253 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 HOXA5P20719 270 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 UBE2G2P60604 165 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 IQCF2Q8IXL9 164 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 CYB561D1Q8N8Q1 229 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 TMEM75Q8N9X5 138 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 MBD3L1Q8WWY6 194 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 ATG101Q9BSB4 218 aa11.05□□□□□ -0.64
RPS28-203ENST00000600659 FAT2Q9NYQ8 4349 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 hCG_2014768A0A024R1R8 64 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 SPINK4O60575 86 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 ZNF80P51504 273 aaPredicted RBP11.04□□□□□ -0.64
RPS28-203ENST00000600659 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 LINC00479Q96M42 142 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 C8orf49Q96NF6 230 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 TREM1Q9NP99 234 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 PSG8Q9UQ74 426 aa11.04□□□□□ -0.64
RPS28-203ENST00000600659 UMAD1C9J7I0 102 aa11.03□□□□□ -0.64
RPS28-203ENST00000600659 F5H768 121 aa11.03□□□□□ -0.64
RPS28-203ENST00000600659 MDFICQ9P1T7 246 aa11.03□□□□□ -0.64
RPS28-203ENST00000600659 C11orf21Q9P2W6 132 aa11.03□□□□□ -0.64
RPS28-203ENST00000600659 DNAH17Q9UFH2 4485 aa11.02□□□□□ -0.64
RPS28-203ENST00000600659 TRAV34A0A0B4J273 112 aa11.02□□□□□ -0.65
RPS28-203ENST00000600659 A0A1B0GVG6 124 aa11.02□□□□□ -0.65
RPS28-203ENST00000600659 PEX7O00628 323 aa11.02□□□□□ -0.65
RPS28-203ENST00000600659 PFDN1O60925 122 aa11.02□□□□□ -0.65
RPS28-203ENST00000600659 TPT1P13693 172 aaKnown RBP11.02□□□□□ -0.65
RPS28-203ENST00000600659 FLI1Q01543 452 aaPredicted RBP11.02□□□□□ -0.65
RPS28-203ENST00000600659 FAM213BQ8TBF2 198 aa11.02□□□□□ -0.65
RPS28-203ENST00000600659 BIRC6Q9NR09 4857 aa11.02□□□□□ -0.65
RPS28-203ENST00000600659 TRAV21A0A0B4J279 112 aa11.01□□□□□ -0.65
RPS28-203ENST00000600659 AKAP14Q86UN6 197 aa11.01□□□□□ -0.65
RPS28-203ENST00000600659 ARL2-SNX15V9GYD0 113 aa11.01□□□□□ -0.65
RPS28-203ENST00000600659 TRGV1A0A0A0MS02 117 aa11□□□□□ -0.65
RPS28-203ENST00000600659 TYMSP04818 313 aa11□□□□□ -0.65
RPS28-203ENST00000600659 P0DMU3 169 aa11□□□□□ -0.65
RPS28-203ENST00000600659 FAM231AP0DMU4 169 aa11□□□□□ -0.65
RPS28-203ENST00000600659 FAM231CP0DMU5 169 aa11□□□□□ -0.65
RPS28-203ENST00000600659 EIF5AP63241 154 aaKnown RBP11□□□□□ -0.65
RPS28-203ENST00000600659 ZNF415Q09FC8 603 aa11□□□□□ -0.65
RPS28-203ENST00000600659 TMEM183BQ1AE95 376 aa11□□□□□ -0.65
RPS28-203ENST00000600659 DPPA3Q6W0C5 159 aa11□□□□□ -0.65
RPS28-203ENST00000600659 PRNTQ86SH4 94 aa11□□□□□ -0.65
RPS28-203ENST00000600659 Q86TA4 180 aa11□□□□□ -0.65
RPS28-203ENST00000600659 TMEM183AQ8IXX5 376 aa11□□□□□ -0.65
RPS28-203ENST00000600659 C9orf62Q8N4C0 152 aa11□□□□□ -0.65
RPS28-203ENST00000600659 C15orf53Q8NAA6 179 aa11□□□□□ -0.65
RPS28-203ENST00000600659 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
RPS28-203ENST00000600659 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms