RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TIRAPP58753 221 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 IL15RAQ13261 267 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 PDE6HQ13956 83 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 WFDC2Q14508 124 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 Q6ZRG5 221 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 Q8N814 137 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 OR1L4Q8NGR5 311 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 MITD1Q8WV92 249 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 SLC39A9Q9NUM3 307 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 GSKIPQ9P0R6 139 aa4.06□□□□□ -1.76
VRK3-220ENST00000600259 TRGV4A0A0C4DH28 118 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 TRBV7-9A0A0J9YWB2 115 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 FAM24AA6NFZ4 105 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 RGS13O14921 159 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 CST7O76096 145 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 SCGB1D2O95969 90 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 ORM1P02763 201 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 SRIP30626 198 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 ZNF266Q14584 549 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 BAK1Q16611 211 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 LINC01556Q5JQF7 62 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 GCSAMLQ5JQS6 135 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 SERTAD4-AS1Q5TG53 156 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 LINC00299Q6ZSB3 139 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 C10orf126Q8N4M7 172 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 C12orf45Q8N5I9 185 aaPredicted RBP4.05□□□□□ -1.76
VRK3-220ENST00000600259 BLNKQ8WV28 456 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 PFDN5Q99471 154 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 SDHCQ99643 169 aaPredicted RBP4.05□□□□□ -1.76
VRK3-220ENST00000600259 SRRQ9GZT4 340 aa4.05□□□□□ -1.76
VRK3-220ENST00000600259 TRAV4A0A0B4J268 109 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 ATP6V1G1O75348 118 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 PLA2G1BP04054 148 aaKnown RBP4.04□□□□□ -1.76
VRK3-220ENST00000600259 NBEAP1P0C6P0 100 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 ZNF138P52744 262 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 RAB31Q13636 194 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 TDRG1Q3Y452 100 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 MUC21Q5SSG8 566 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 Q6AWC8 147 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 FAM122CQ6P4D5 195 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 DEFB104AQ8WTQ1 72 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 SPXQ9BT56 116 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 SLC25A2Q9BXI2 301 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 UQCC1Q9NVA1 299 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 TIMM9Q9Y5J7 89 aa4.04□□□□□ -1.76
VRK3-220ENST00000600259 IGSF23A1L1A6 192 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 NAP1L6A6NFF2 107 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 CCDC160A6NGH7 325 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 CCSO14618 274 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 GNRH2O43555 120 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 GATA1P15976 413 aaPredicted RBP4.03□□□□□ -1.76
VRK3-220ENST00000600259 S100A11P31949 105 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 TMEM183BQ1AE95 376 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 TMEM78Q5T7P6 136 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 MIR17HGQ75NE6 70 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 TMEM183AQ8IXX5 376 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 TMEM252Q8N6L7 170 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 Q8TAT8 98 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 FXYD5Q96DB9 178 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 ARPC5LQ9BPX5 153 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 TXNDC17Q9BRA2 123 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 C20orf85Q9H1P6 137 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
VRK3-220ENST00000600259 IGHV3-16A0A0C4DH30 117 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 RBAKDNA6NC62 111 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 C9JCJ5 164 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 L7N2F9 121 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 PLA2G10O15496 165 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 PSCAO43653 123 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 OXTP01178 125 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 SULT1A1P50225 295 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 BCAP31P51572 246 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 CAV2P51636 162 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 VAMP2P63027 116 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 DPPA3Q6W0C5 159 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 SH2D6Q7Z4S9 175 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 Q8N3U1 123 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 OR4C5Q8NGB2 326 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 PCNPQ8WW12 178 aaKnown RBP4.02□□□□□ -1.77
VRK3-220ENST00000600259 TVP23CQ96ET8 276 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 PHYHIPLQ96FC7 376 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 C2orf50Q96LR7 162 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 OR51M1Q9H341 326 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 AAMDCQ9H7C9 122 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 Q9HAA7 133 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 LYRM2Q9NU23 88 aaPredicted RBP4.02□□□□□ -1.77
VRK3-220ENST00000600259 LSM5Q9Y4Y9 91 aaKnown RBP4.02□□□□□ -1.77
VRK3-220ENST00000600259 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
VRK3-220ENST00000600259 UBE2L5PA0A1B0GUS4 154 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 M0R2P5 195 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 PFN1P07737 140 aaKnown RBP4.01□□□□□ -1.77
VRK3-220ENST00000600259 OR10J4P0C629 311 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 FGF7P21781 194 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 NHLH2Q02577 135 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 BAXQ07812 192 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 RAB32Q13637 225 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 ZNF846Q147U1 533 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 ATP6V1FQ16864 119 aa4.01□□□□□ -1.77
VRK3-220ENST00000600259 LINC01620Q4KN68 170 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms