RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 DNAH6Q9C0G6 4158 aa10□□□□□ -0.81
LIG1-218ENST00000599322 ARPC5O15511 151 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
LIG1-218ENST00000599322 STAG3L2P0CL84 134 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 STAG3L3P0CL85 134 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 Q5BKY6 102 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 IBA57Q5T440 356 aaKnown RBP9.99□□□□□ -0.81
LIG1-218ENST00000599322 RPL7L1Q6DKI1 246 aaKnown RBP9.99□□□□□ -0.81
LIG1-218ENST00000599322 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 ZFAND2AQ8N6M9 145 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 Q8TAT8 98 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
LIG1-218ENST00000599322 EIF3GO75821 320 aaKnown RBP eCLIP9.98□□□□□ -0.81
LIG1-218ENST00000599322 CCL18P55774 89 aa9.98□□□□□ -0.81
LIG1-218ENST00000599322 FAM3BP58499 235 aaPredicted RBP9.98□□□□□ -0.81
LIG1-218ENST00000599322 ZNF415Q09FC8 603 aa9.98□□□□□ -0.81
LIG1-218ENST00000599322 GOLT1AQ6ZVE7 132 aa9.98□□□□□ -0.81
LIG1-218ENST00000599322 ST6GAL2Q96JF0 529 aa9.98□□□□□ -0.81
LIG1-218ENST00000599322 TRGV1A0A0A0MS02 117 aa9.97□□□□□ -0.81
LIG1-218ENST00000599322 RNF222A6NCQ9 220 aa9.97□□□□□ -0.81
LIG1-218ENST00000599322 GCHFRP30047 84 aa9.97□□□□□ -0.81
LIG1-218ENST00000599322 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
LIG1-218ENST00000599322 SH3BGRL3Q9H299 93 aa9.97□□□□□ -0.81
LIG1-218ENST00000599322 TRGV11A0A075B6L2 103 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 TRAV21A0A0B4J279 112 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 FBLL1A6NHQ2 334 aaKnown RBP9.96□□□□□ -0.82
LIG1-218ENST00000599322 TCL1AP56279 114 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 ZFP69Q49AA0 526 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 SOHLH1Q5JUK2 328 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 STOML3Q8TAV4 291 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 TREM1Q9NP99 234 aa9.96□□□□□ -0.82
LIG1-218ENST00000599322 CTXND1A0A1B0GTU2 59 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 PPT1P50897 306 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
LIG1-218ENST00000599322 EIF5AP63241 154 aaKnown RBP9.95□□□□□ -0.82
LIG1-218ENST00000599322 LGALS9BQ3B8N2 356 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 MUC21Q5SSG8 566 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 Q6ZTI0 123 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 NKX6-2Q9C056 277 aaPredicted RBP9.95□□□□□ -0.82
LIG1-218ENST00000599322 NAGKQ9UJ70 344 aa9.95□□□□□ -0.82
LIG1-218ENST00000599322 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 IFNA7P01567 189 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 SLAQ13239 276 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 PRR9Q5T870 116 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 Q6AWC8 147 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 SPXQ9BT56 116 aa9.94□□□□□ -0.82
LIG1-218ENST00000599322 A0A0D9SG52 128 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 KANTRA0A1W2PQU2 76 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 H3BNG1 76 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 M0R2N4 97 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 SPINK4O60575 86 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 TCRAP04437 139 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 GNG5P63218 68 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 SAPCD1Q5SSQ6 148 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 LINC00336Q6ZUF6 198 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 C11orf72Q8NBR9 251 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 C18orf15Q96N68 181 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 EPDR1Q9UM22 224 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 KLF12Q9Y4X4 402 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 HECTD4Q9Y4D8 3996 aa9.93□□□□□ -0.82
LIG1-218ENST00000599322 IGLV2-18A0A075B6J9 118 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 A0A0J9YY99 117 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 F6UZH7 168 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 ZNF345Q14585 488 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 TMEM183BQ1AE95 376 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 SSX7Q7RTT5 188 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 TMEM183AQ8IXX5 376 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 CYB561D1Q8N8Q1 229 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 SUN5Q8TC36 379 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 TMPRSS5Q9H3S3 457 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 SDF2L1Q9HCN8 221 aa9.92□□□□□ -0.82
LIG1-218ENST00000599322 HMSDA8MTL9 139 aa9.91□□□□□ -0.82
LIG1-218ENST00000599322 PFDN1O60925 122 aa9.91□□□□□ -0.82
LIG1-218ENST00000599322 FLI1Q01543 452 aaPredicted RBP9.91□□□□□ -0.82
LIG1-218ENST00000599322 SMUG1Q53HV7 270 aa9.91□□□□□ -0.82
LIG1-218ENST00000599322 KCNRGQ8N5I3 272 aa9.91□□□□□ -0.82
LIG1-218ENST00000599322 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
LIG1-218ENST00000599322 TP53TG3Q9ULZ0 132 aa9.91□□□□□ -0.82
LIG1-218ENST00000599322 PSG8Q9UQ74 426 aa9.91□□□□□ -0.82
LIG1-218ENST00000599322 KIAA1109Q2LD37 5005 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 TRAV8-1A0A0A6YYK1 113 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 MAP1LC3B2A6NCE7 125 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 UMAD1C9J7I0 102 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 SMLR1H3BR10 107 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 PRNTQ86SH4 94 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 ZNF471Q9BX82 626 aaPredicted RBP9.9□□□□□ -0.82
LIG1-218ENST00000599322 MAP1LC3BQ9GZQ8 125 aa9.9□□□□□ -0.82
LIG1-218ENST00000599322 PAX4O43316 350 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 HOXA5P20719 270 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 UBE2G2P60604 165 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 TDRG1Q3Y452 100 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 TMEM75Q8N9X5 138 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 HIST1H2BAQ96A08 127 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 PRO0255Q9UI72 69 aa9.89□□□□□ -0.83
LIG1-218ENST00000599322 G3V3Q6 166 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms