RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 SGK494Q96LW2 274 aa13.11□□□□□ -0.31
SNRPA-205ENST00000598923 IGHV1OR15-1A0A075B7D0 117 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 TRBV7-9A0A0J9YWB2 115 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 CTXND1A0A1B0GTU2 59 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 HMSDA8MTL9 139 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 SUMO1P63165 101 aaKnown RBP13.1□□□□□ -0.31
SNRPA-205ENST00000598923 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 MUC21Q5SSG8 566 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 ST6GAL2Q96JF0 529 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 TMPRSS5Q9H3S3 457 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 TP53TG3Q9ULZ0 132 aa13.1□□□□□ -0.31
SNRPA-205ENST00000598923 FGF8P55075 233 aaPredicted RBP13.09□□□□□ -0.31
SNRPA-205ENST00000598923 ANXA2RQ3ZCQ2 193 aa13.09□□□□□ -0.31
SNRPA-205ENST00000598923 ZNF680Q8NEM1 530 aa13.09□□□□□ -0.31
SNRPA-205ENST00000598923 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
SNRPA-205ENST00000598923 LINC00467Q9BRT7 94 aa13.09□□□□□ -0.31
SNRPA-205ENST00000598923 A0A0D9SG52 128 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 P0DMU3 169 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 FAM231AP0DMU4 169 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 FAM231CP0DMU5 169 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 OR5I1Q13606 314 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 ZNF345Q14585 488 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 ARL6IP6Q8N6S5 226 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 ZNF471Q9BX82 626 aaPredicted RBP13.08□□□□□ -0.32
SNRPA-205ENST00000598923 KLF12Q9Y4X4 402 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 LENEPQ9Y5L5 61 aa13.08□□□□□ -0.32
SNRPA-205ENST00000598923 KANTRA0A1W2PQU2 76 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 TCRAP04437 139 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 UBE2G2P60604 165 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
SNRPA-205ENST00000598923 Q6ZTI0 123 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 UBE2DNLQ8IWF7 75 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 C11orf72Q8NBR9 251 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 TMED6Q8WW62 240 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 KRTAP17-1Q9BYP8 105 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 TREM1Q9NP99 234 aa13.07□□□□□ -0.32
SNRPA-205ENST00000598923 TRGV1A0A0A0MS02 117 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 F6UZH7 168 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 NUDT3O95989 172 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 TVP23CQ96ET8 276 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 NAGKQ9UJ70 344 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 EPDR1Q9UM22 224 aa13.06□□□□□ -0.32
SNRPA-205ENST00000598923 FAT2Q9NYQ8 4349 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 TRGV2A0A075B6R0 118 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 K7EQM0 130 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 BCL2L11O43521 198 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 PFDN1O60925 122 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 IFNA7P01567 189 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 FAM159AQ6UWV7 190 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 LINC00612Q8N6U2 182 aa13.05□□□□□ -0.32
SNRPA-205ENST00000598923 HERC2O95714 4834 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 SERTM2A0A1B0GWG4 89 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 A0A1W2PRE2 83 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 MAP1LC3B2A6NCE7 125 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 FHITP49789 147 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 TCL1AP56279 114 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 Q6AWC8 147 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 Q6ZNX1 250 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 LINC00336Q6ZUF6 198 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 TMUB2Q71RG4 321 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 PRNTQ86SH4 94 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 NDFIP1Q9BT67 221 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 MAP1LC3BQ9GZQ8 125 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 PSG8Q9UQ74 426 aa13.04□□□□□ -0.32
SNRPA-205ENST00000598923 DNAH2Q9P225 4427 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 ZNF415Q09FC8 603 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 TMEM183BQ1AE95 376 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 IBA57Q5T440 356 aaKnown RBP13.03□□□□□ -0.32
SNRPA-205ENST00000598923 TMEM183AQ8IXX5 376 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 C15orf53Q8NAA6 179 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 MDFICQ9P1T7 246 aa13.03□□□□□ -0.32
SNRPA-205ENST00000598923 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 A0A0J9YY99 117 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 SPINK4O60575 86 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 SEC11BP0C7V7 166 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 HOXA5P20719 270 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 CYB561D1Q8N8Q1 229 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 FAM213BQ8TBF2 198 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 LINC00479Q96M42 142 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 C8orf49Q96NF6 230 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 MRPL16Q9NX20 251 aaKnown RBP13.02□□□□□ -0.33
SNRPA-205ENST00000598923 DNAH17Q9UFH2 4485 aa13.02□□□□□ -0.33
SNRPA-205ENST00000598923 TRAV26-1A0A087WT03 109 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 TRAV34A0A0B4J273 112 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 A0A1B0GV50 99 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 A0A1B0GVY2 172 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 FAM74A7A6NL05 159 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 GNRH2O43555 120 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 EIF5AP63241 154 aaKnown RBP13.01□□□□□ -0.33
SNRPA-205ENST00000598923 FLI1Q01543 452 aaPredicted RBP13.01□□□□□ -0.33
SNRPA-205ENST00000598923 ATG101Q9BSB4 218 aa13.01□□□□□ -0.33
SNRPA-205ENST00000598923 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
SNRPA-205ENST00000598923 IGLV2-11P01706 119 aa13□□□□□ -0.33
SNRPA-205ENST00000598923 IGHV3-53P01767 116 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms