RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 DPPA3Q6W0C5 159 aa9.65□□□□□ -0.86
SOX2-OT-229ENST00000598474 C2CD4CQ8TF44 421 aa9.65□□□□□ -0.86
SOX2-OT-229ENST00000598474 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
SOX2-OT-229ENST00000598474 LINC00467Q9BRT7 94 aa9.65□□□□□ -0.86
SOX2-OT-229ENST00000598474 DYNC2H1Q8NCM8 4307 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-229ENST00000598474 LYSTQ99698 3801 aa9.65□□□□□ -0.87
SOX2-OT-229ENST00000598474 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 A0A1B0GV50 99 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 F6UZH7 168 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 DAD1P61803 113 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 SLC51BQ86UW2 128 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 CCDC28AQ8IWP9 274 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 CYB561D1Q8N8Q1 229 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 LINC00479Q96M42 142 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 ATG101Q9BSB4 218 aa9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 TIMM8BQ9Y5J9 83 aaPredicted RBP9.64□□□□□ -0.87
SOX2-OT-229ENST00000598474 IGLL5B9A064 214 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 IFNA7P01567 189 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 H2AFB1P0C5Y9 115 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 DEFB130BP0DP73 79 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 DEFB130AP0DP74 79 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 Q6AWC8 147 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 C11orf72Q8NBR9 251 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 NKX6-2Q9C056 277 aaPredicted RBP9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 TREM1Q9NP99 234 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 TP53TG3Q9ULZ0 132 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 TENM2Q9NT68 2774 aa9.63□□□□□ -0.87
SOX2-OT-229ENST00000598474 PLECQ15149 4684 aaKnown RBP9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 IGHV1OR15-1A0A075B7D0 117 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 CBY3A6NI87 242 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 K7EQM0 130 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 PEX7O00628 323 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 RGS13O14921 159 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 ATP5G3P48201 142 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 NKX2-5P52952 324 aaPredicted RBP9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 FLI1Q01543 452 aaPredicted RBP9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 EIF5AL1Q6IS14 154 aaKnown RBP9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 GSN-AS1Q9NRJ2 163 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 ARL2-SNX15V9GYD0 113 aa9.62□□□□□ -0.87
SOX2-OT-229ENST00000598474 IGHV4-4A0A075B6R2 117 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 PAGE4O60829 102 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 HTN3P15516 51 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 SULT1A2P50226 295 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 RAB5CP51148 216 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 MUC21Q5SSG8 566 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 PRNTQ86SH4 94 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 ZNF680Q8NEM1 530 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 LINC00476Q8WZB0 136 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 APLNQ9ULZ1 77 aa9.61□□□□□ -0.87
SOX2-OT-229ENST00000598474 SNURFLB1AK76 121 aa9.6□□□□□ -0.87
SOX2-OT-229ENST00000598474 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
SOX2-OT-229ENST00000598474 CCL20P78556 96 aa9.6□□□□□ -0.87
SOX2-OT-229ENST00000598474 DAZ2Q13117 558 aaKnown RBP9.6□□□□□ -0.87
SOX2-OT-229ENST00000598474 HIST1H2BAQ96A08 127 aa9.6□□□□□ -0.87
SOX2-OT-229ENST00000598474 KLF12Q9Y4X4 402 aa9.6□□□□□ -0.87
SOX2-OT-229ENST00000598474 RYR3Q15413 4870 aa9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 TRAV1-1A0A0B4J248 108 aa9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 TRAV21A0A0B4J279 112 aa9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 FBLL1A6NHQ2 334 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 TCL1AP56279 114 aa9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 IBA57Q5T440 356 aaKnown RBP9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 Q86TA4 180 aa9.59□□□□□ -0.87
SOX2-OT-229ENST00000598474 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 GAGE7O76087 117 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 GCGP01275 180 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 PPT1P50897 306 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 TCTAP57738 103 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 TMEM183BQ1AE95 376 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 TDRG1Q3Y452 100 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 FAM159AQ6UWV7 190 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 Q6ZTI0 123 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 TMEM183AQ8IXX5 376 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 TCEAL7Q9BRU2 100 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 BOLA1Q9Y3E2 137 aa9.58□□□□□ -0.88
SOX2-OT-229ENST00000598474 ALMS1Q8TCU4 4167 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 SACSQ9NZJ4 4579 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 LY6G6CO95867 125 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 ATP5G1P05496 136 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 SMUG1Q53HV7 270 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 GNG13Q9P2W3 67 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
SOX2-OT-229ENST00000598474 TRGV1A0A0A0MS02 117 aa9.56□□□□□ -0.88
SOX2-OT-229ENST00000598474 SCO2A0A1W2PP80 73 aa9.56□□□□□ -0.88
SOX2-OT-229ENST00000598474 GNRH2O43555 120 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms