RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 IGKV2D-40P01614 121 aaPredicted RBP6.67□□□□□ -1.34
TRIM28-210ENST00000597618 IGLV2-8P01709 118 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 PFN1P07737 140 aaKnown RBP6.67□□□□□ -1.34
TRIM28-210ENST00000597618 CAMLGP49069 296 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 AP3S2P59780 193 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 LINC01620Q4KN68 170 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 MUC21Q5SSG8 566 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 OR4C5Q8NGB2 326 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 MCFD2Q8NI22 146 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 TMEM14CQ9P0S9 112 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 ZNF492Q9P255 531 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 TNXBP22105 4242 aa6.67□□□□□ -1.34
TRIM28-210ENST00000597618 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 TRAV8-3A0A0A6YYJ7 113 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 ZNF138P52744 262 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 UBE2MP61081 183 aaKnown RBP6.66□□□□□ -1.34
TRIM28-210ENST00000597618 ARL16Q0P5N6 197 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 TMEM183BQ1AE95 376 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 LELP1Q5T871 98 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 MIC13Q5XKP0 118 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 NRARPQ7Z6K4 114 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 TMEM183AQ8IXX5 376 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 EXOC3-AS1Q8N2X6 119 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 SOSTQ9BQB4 213 aa6.66□□□□□ -1.34
TRIM28-210ENST00000597618 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 GATA1P15976 413 aaPredicted RBP6.65□□□□□ -1.34
TRIM28-210ENST00000597618 RPL37AP61513 92 aaKnown RBP6.65□□□□□ -1.34
TRIM28-210ENST00000597618 ZNF266Q14584 549 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 TOR2AQ5JU69 321 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 FAM122CQ6P4D5 195 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 TOMM5Q8N4H5 51 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 Q8TAT8 98 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 COX11Q9Y6N1 276 aa6.65□□□□□ -1.34
TRIM28-210ENST00000597618 C9orf170A2RU37 121 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 M0R2P5 195 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 IGLV2-11P01706 119 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 PYYP10082 97 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 SPCS2Q15005 226 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 BAK1Q16611 211 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 FAM159AQ6UWV7 190 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 Q8N976 141 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 ATP6V0E2Q8NHE4 81 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 DYNC2LI1Q8TCX1 351 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 DEDD2Q8WXF8 326 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 TRIM63Q969Q1 353 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 PRADC1Q9BSG0 188 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 GPN1Q9HCN4 374 aaPredicted RBP6.64□□□□□ -1.35
TRIM28-210ENST00000597618 SLC39A9Q9NUM3 307 aa6.64□□□□□ -1.35
TRIM28-210ENST00000597618 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 C7orf66A4D0T2 115 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 FBLL1A6NHQ2 334 aaKnown RBP6.63□□□□□ -1.35
TRIM28-210ENST00000597618 RPL29P47914 159 aaKnown RBP6.63□□□□□ -1.35
TRIM28-210ENST00000597618 RHOHQ15669 191 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 IAH1Q2TAA2 248 aaPredicted RBP6.63□□□□□ -1.35
TRIM28-210ENST00000597618 Q6AWC8 147 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 BAALCQ8WXS3 180 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 GTSF1LQ9H1H1 148 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 C20orf85Q9H1P6 137 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 UQCC1Q9NVA1 299 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 WDR83OSQ9Y284 106 aa6.63□□□□□ -1.35
TRIM28-210ENST00000597618 TRBV6-4A0A1B0GX49 114 aa6.62□□□□□ -1.35
TRIM28-210ENST00000597618 MT1HL1P0DM35 61 aa6.62□□□□□ -1.35
TRIM28-210ENST00000597618 HNRNPA3P51991 378 aaKnown RBP6.62□□□□□ -1.35
TRIM28-210ENST00000597618 RMI2Q96E14 147 aa6.62□□□□□ -1.35
TRIM28-210ENST00000597618 SH3BGRL3Q9H299 93 aa6.62□□□□□ -1.35
TRIM28-210ENST00000597618 GSKIPQ9P0R6 139 aa6.62□□□□□ -1.35
TRIM28-210ENST00000597618 NAGKQ9UJ70 344 aa6.62□□□□□ -1.35
TRIM28-210ENST00000597618 RBAKDNA6NC62 111 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 RNF222A6NCQ9 220 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 GGTLC3B5MD39 225 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 L7N2F9 121 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 CIDEAO60543 219 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 VAMP2P63027 116 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 BAXQ07812 192 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 Q8N3U1 123 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 DAZAP1Q96EP5 407 aaKnown RBP6.61□□□□□ -1.35
TRIM28-210ENST00000597618 SLC25A2Q9BXI2 301 aa6.61□□□□□ -1.35
TRIM28-210ENST00000597618 TRAV8-1A0A0A6YYK1 113 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 UBE2L5PA0A1B0GUS4 154 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 C5orf51A6NDU8 294 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 CST7O76096 145 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 MBPP02686 304 aaPredicted RBP6.6□□□□□ -1.35
TRIM28-210ENST00000597618 NBEAP1P0C6P0 100 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 SMIM18P0DKX4 95 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 CSN1S1P47710 185 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 BCAP31P51572 246 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 CAV2P51636 162 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 VWC2Q2TAL6 325 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 PYDC2Q56P42 97 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 DAZ4Q86SG3 579 aaKnown RBP6.6□□□□□ -1.35
TRIM28-210ENST00000597618 CHAC2Q8WUX2 184 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 ATP5SQ99766 215 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 DAZ3Q9NR90 486 aaKnown RBP6.6□□□□□ -1.35
TRIM28-210ENST00000597618 LENEPQ9Y5L5 61 aa6.6□□□□□ -1.35
TRIM28-210ENST00000597618 OR10J4P0C629 311 aa6.59□□□□□ -1.35
TRIM28-210ENST00000597618 Q6ZRU5 148 aa6.59□□□□□ -1.35
TRIM28-210ENST00000597618 OR51M1Q9H341 326 aa6.59□□□□□ -1.35
TRIM28-210ENST00000597618 RPH3ALQ9UNE2 315 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms