RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 FAM222AQ5U5X8 452 aa14.09□□□□□ -0.15
SHKBP1-214ENST00000597396 PHLDA1Q8WV24 401 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-214ENST00000597396 TREM1Q9NP99 234 aa14.09□□□□□ -0.15
SHKBP1-214ENST00000597396 PEX7O00628 323 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 ZNF324O75467 553 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 FLI1Q01543 452 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 ZNF493Q6ZR52 646 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 ZNF767PQ75MW2 155 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 TMEM75Q8N9X5 138 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 TMEM263Q8WUH6 116 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 DKK2Q9UBU2 259 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 PSG8Q9UQ74 426 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
SHKBP1-214ENST00000597396 FBLL1A6NHQ2 334 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-214ENST00000597396 F6UZH7 168 aa14.07□□□□□ -0.16
SHKBP1-214ENST00000597396 RGS13O14921 159 aa14.07□□□□□ -0.16
SHKBP1-214ENST00000597396 ATP5G3P48201 142 aa14.07□□□□□ -0.16
SHKBP1-214ENST00000597396 PRNTQ86SH4 94 aa14.07□□□□□ -0.16
SHKBP1-214ENST00000597396 HIST1H2BAQ96A08 127 aa14.07□□□□□ -0.16
SHKBP1-214ENST00000597396 TRAV1-1A0A0B4J248 108 aa14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 C12orf74Q32Q52 190 aa14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 CEMP1Q6PRD7 247 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 ALKAL2Q6UX46 152 aa14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 Q6ZTC4 211 aa14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 EIF4E3Q8N5X7 224 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 RNASE8Q8TDE3 154 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 TCEAL7Q9BRU2 100 aa14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 TENM2Q9NT68 2774 aa14.06□□□□□ -0.16
SHKBP1-214ENST00000597396 DYNC2H1Q8NCM8 4307 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 TRAV34A0A0B4J273 112 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 CBY3A6NI87 242 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 LYRM9A8MSI8 78 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 C11orf94C9JXX5 98 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 Q6AWC8 147 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 TVP23CQ96ET8 276 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 MANBALQ9NQG1 85 aa14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 KLK5Q9Y337 293 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-214ENST00000597396 IGHV1OR15-1A0A075B7D0 117 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 PLAC8L1A1L4L8 177 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 SNURFLB1AK76 121 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 IGLV2-11P01706 119 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 DAD1P61803 113 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 Q6ZQT7 251 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 LINC00479Q96M42 142 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 LINC00467Q9BRT7 94 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 GNG13Q9P2W3 67 aa14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 TIMM8BQ9Y5J9 83 aaPredicted RBP14.04□□□□□ -0.16
SHKBP1-214ENST00000597396 TRAV10A0A0B4J240 114 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 AKR1C3P42330 323 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 UBE2G1P62253 170 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 CCL20P78556 96 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 MUC21Q5SSG8 566 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 SAPCD1Q5SSQ6 148 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 ZNF680Q8NEM1 530 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 C8orf49Q96NF6 230 aa14.03□□□□□ -0.16
SHKBP1-214ENST00000597396 CSMD3Q7Z407 3707 aa14.02□□□□□ -0.16
SHKBP1-214ENST00000597396 TRAV21A0A0B4J279 112 aa14.02□□□□□ -0.17
SHKBP1-214ENST00000597396 ANXA2RQ3ZCQ2 193 aa14.02□□□□□ -0.17
SHKBP1-214ENST00000597396 SMUG1Q53HV7 270 aa14.02□□□□□ -0.17
SHKBP1-214ENST00000597396 NOP10Q9NPE3 64 aaKnown RBP14.02□□□□□ -0.17
SHKBP1-214ENST00000597396 NAGKQ9UJ70 344 aa14.02□□□□□ -0.17
SHKBP1-214ENST00000597396 LCE6AA0A183 80 aa14.01□□□□□ -0.17
SHKBP1-214ENST00000597396 IFNA1P01562 189 aa14.01□□□□□ -0.17
SHKBP1-214ENST00000597396 FAM159AQ6UWV7 190 aa14.01□□□□□ -0.17
SHKBP1-214ENST00000597396 Q86TA4 180 aa14.01□□□□□ -0.17
SHKBP1-214ENST00000597396 FMC1Q96HJ9 113 aa14.01□□□□□ -0.17
SHKBP1-214ENST00000597396 DEFB131BA0A096LNP1 70 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 GCGP01275 180 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 DEFB130BP0DP73 79 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 DEFB130AP0DP74 79 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 BLOC1S1P78537 153 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 C2CD4CQ8TF44 421 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 TP53TG3Q9ULZ0 132 aa14□□□□□ -0.17
SHKBP1-214ENST00000597396 SCO2A0A1W2PP80 73 aa13.99□□□□□ -0.17
SHKBP1-214ENST00000597396 GSN-AS1Q9NRJ2 163 aa13.99□□□□□ -0.17
SHKBP1-214ENST00000597396 STARD9Q9P2P6 4700 aa13.99□□□□□ -0.17
SHKBP1-214ENST00000597396 HTN3P15516 51 aa13.98□□□□□ -0.17
SHKBP1-214ENST00000597396 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
SHKBP1-214ENST00000597396 IBA57Q5T440 356 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-214ENST00000597396 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
SHKBP1-214ENST00000597396 KLF12Q9Y4X4 402 aa13.98□□□□□ -0.17
SHKBP1-214ENST00000597396 TRGV11A0A075B6L2 103 aa13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 S100A9P06702 114 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 TCL1AP56279 114 aa13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 DAZ2Q13117 558 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 TMEM183BQ1AE95 376 aa13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 TMEM183AQ8IXX5 376 aa13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 C11orf72Q8NBR9 251 aa13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 ZFP30Q9Y2G7 519 aa13.97□□□□□ -0.17
SHKBP1-214ENST00000597396 TRBV6-1A0A0K0K1D8 114 aa13.96□□□□□ -0.17
SHKBP1-214ENST00000597396 IGLL5B9A064 214 aa13.96□□□□□ -0.17
SHKBP1-214ENST00000597396 PFN1P07737 140 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-214ENST00000597396 KCNS1Q96KK3 526 aa13.96□□□□□ -0.17
SHKBP1-214ENST00000597396 RYR2Q92736 4967 aa13.96□□□□□ -0.17
SHKBP1-214ENST00000597396 SACSQ9NZJ4 4579 aa13.96□□□□□ -0.18
SHKBP1-214ENST00000597396 GAGE12BA1L429 117 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 GAGE7O76087 117 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 GAGE12FP0CL80 117 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 GAGE12GP0CL81 117 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms