RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 FMC1Q96HJ9 113 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 LINC00479Q96M42 142 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 EDA2RQ9HAV5 297 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 TREM1Q9NP99 234 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 STAB2Q8WWQ8 2551 aa10.38□□□□□ -0.75
VRK3-213ENST00000597215 TAS2R60P59551 318 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 UBE2G1P62253 170 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 MEF2BQ02080 365 aaPredicted RBP10.37□□□□□ -0.75
VRK3-213ENST00000597215 SAPCD1Q5SSQ6 148 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 Q86TA4 180 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 WWC2-AS2Q96NR7 200 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 VAX2Q9UIW0 290 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 KLF12Q9Y4X4 402 aa10.37□□□□□ -0.75
VRK3-213ENST00000597215 LOC102723971A0A1B0GUV8 181 aa10.36□□□□□ -0.75
VRK3-213ENST00000597215 TMEM189A5PLL7 270 aa10.36□□□□□ -0.75
VRK3-213ENST00000597215 ZNF705GA8MUZ8 300 aaPredicted RBP10.36□□□□□ -0.75
VRK3-213ENST00000597215 PDE6DO43924 150 aa10.36□□□□□ -0.75
VRK3-213ENST00000597215 ZNF324O75467 553 aaPredicted RBP10.36□□□□□ -0.75
VRK3-213ENST00000597215 C2CD4CQ8TF44 421 aa10.36□□□□□ -0.75
VRK3-213ENST00000597215 C11orf52Q96A22 123 aa10.36□□□□□ -0.75
VRK3-213ENST00000597215 PYGO2Q9BRQ0 406 aa10.36□□□□□ -0.75
VRK3-213ENST00000597215 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
VRK3-213ENST00000597215 DEFB4AO15263 64 aa10.35□□□□□ -0.75
VRK3-213ENST00000597215 S100A9P06702 114 aaKnown RBP10.35□□□□□ -0.75
VRK3-213ENST00000597215 HTN1P15515 57 aa10.35□□□□□ -0.75
VRK3-213ENST00000597215 TMEM183BQ1AE95 376 aa10.35□□□□□ -0.75
VRK3-213ENST00000597215 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
VRK3-213ENST00000597215 Q6AWC8 147 aa10.35□□□□□ -0.75
VRK3-213ENST00000597215 RBFOX3A6NFN3 312 aa10.34□□□□□ -0.75
VRK3-213ENST00000597215 C8orf49Q96NF6 230 aa10.34□□□□□ -0.75
VRK3-213ENST00000597215 LINC00467Q9BRT7 94 aa10.34□□□□□ -0.75
VRK3-213ENST00000597215 ZFP30Q9Y2G7 519 aa10.34□□□□□ -0.75
VRK3-213ENST00000597215 TRAV21A0A0B4J279 112 aa10.33□□□□□ -0.76
VRK3-213ENST00000597215 RGS13O14921 159 aa10.33□□□□□ -0.76
VRK3-213ENST00000597215 LTAP01374 205 aa10.33□□□□□ -0.76
VRK3-213ENST00000597215 ZNF506Q5JVG8 444 aa10.33□□□□□ -0.76
VRK3-213ENST00000597215 ZNF493Q6ZR52 646 aa10.33□□□□□ -0.76
VRK3-213ENST00000597215 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
VRK3-213ENST00000597215 PCNPQ8WW12 178 aaKnown RBP10.33□□□□□ -0.76
VRK3-213ENST00000597215 C16orf74Q96GX8 76 aa10.33□□□□□ -0.76
VRK3-213ENST00000597215 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 GCGP01275 180 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 PRM2P04554 102 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 AZU1P20160 251 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 EMP1P54849 157 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 RAB14P61106 215 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 TOR2AQ5JU69 321 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 ZNF767PQ75MW2 155 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 EIF4E3Q8N5X7 224 aaKnown RBP10.32□□□□□ -0.76
VRK3-213ENST00000597215 FAM210AQ96ND0 272 aa10.32□□□□□ -0.76
VRK3-213ENST00000597215 TEX48A0A1B0GUV7 120 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 CBY3A6NI87 242 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 RPL35P42766 123 aaKnown RBP10.31□□□□□ -0.76
VRK3-213ENST00000597215 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 Q6ZQT7 251 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 BAGE2Q86Y30 109 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 IL17DQ8TAD2 202 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 RNASE8Q8TDE3 154 aaKnown RBP10.31□□□□□ -0.76
VRK3-213ENST00000597215 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
VRK3-213ENST00000597215 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
VRK3-213ENST00000597215 PFN1P07737 140 aaKnown RBP10.3□□□□□ -0.76
VRK3-213ENST00000597215 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
VRK3-213ENST00000597215 MUC21Q5SSG8 566 aa10.3□□□□□ -0.76
VRK3-213ENST00000597215 TMEM183AQ8IXX5 376 aa10.3□□□□□ -0.76
VRK3-213ENST00000597215 C11orf45Q8TAV5 145 aa10.3□□□□□ -0.76
VRK3-213ENST00000597215 DERL1Q9BUN8 251 aa10.3□□□□□ -0.76
VRK3-213ENST00000597215 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
VRK3-213ENST00000597215 PLAC8L1A1L4L8 177 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 CXorf65A6NEN9 183 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 TMEM250H0YL14 139 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 NDUFS6O75380 124 aaKnown RBP10.29□□□□□ -0.76
VRK3-213ENST00000597215 SPART-AS1P0CW21 52 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 MUC7Q8TAX7 377 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 ZC2HC1AQ96GY0 325 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
VRK3-213ENST00000597215 TIMM8BQ9Y5J9 83 aaPredicted RBP10.29□□□□□ -0.76
VRK3-213ENST00000597215 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 LYRM9A8MSI8 78 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 FABP5P3A8MUU1 101 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 SNURFLB1AK76 121 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 IFITM2Q01629 132 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
VRK3-213ENST00000597215 FAM162BQ5T6X4 162 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
VRK3-213ENST00000597215 GNG4P50150 75 aa10.27□□□□□ -0.77
VRK3-213ENST00000597215 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
VRK3-213ENST00000597215 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
VRK3-213ENST00000597215 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.77
VRK3-213ENST00000597215 SMIM12Q96EX1 92 aa10.27□□□□□ -0.77
VRK3-213ENST00000597215 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
VRK3-213ENST00000597215 TP53TG3Q9ULZ0 132 aa10.27□□□□□ -0.77
VRK3-213ENST00000597215 DNAH7Q8WXX0 4024 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms