RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 RBMY1DP0C7P1 496 aaKnown RBP10.81□□□□□ -0.68
VRK3-212ENST00000596814 TSPOP30536 169 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 SAMD5Q5TGI4 173 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 TRPT1Q86TN4 253 aaKnown RBP10.81□□□□□ -0.68
VRK3-212ENST00000596814 DEFB125Q8N687 156 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 SFRP2Q96HF1 295 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 GPX1P07203 203 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 CDKN1BP46527 198 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 ERVFC1-1P60608 527 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 FAM162BQ5T6X4 162 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 PRR9Q5T870 116 aa10.81□□□□□ -0.68
VRK3-212ENST00000596814 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
VRK3-212ENST00000596814 C7orf77A4D0Y5 90 aa10.8□□□□□ -0.68
VRK3-212ENST00000596814 KLLNB2CW77 178 aa10.8□□□□□ -0.68
VRK3-212ENST00000596814 M0R2Z0 102 aa10.8□□□□□ -0.68
VRK3-212ENST00000596814 ZNF80P51504 273 aaPredicted RBP10.8□□□□□ -0.68
VRK3-212ENST00000596814 KRTAP10-11P60412 298 aa10.8□□□□□ -0.68
VRK3-212ENST00000596814 RNF212Q495C1 297 aa10.8□□□□□ -0.68
VRK3-212ENST00000596814 IBA57Q5T440 356 aaKnown RBP10.8□□□□□ -0.68
VRK3-212ENST00000596814 ATRAIDQ6UW56 229 aa10.8□□□□□ -0.68
VRK3-212ENST00000596814 LINC00322Q6ZN03 302 aaPredicted RBP10.8□□□□□ -0.68
VRK3-212ENST00000596814 C19orf71A6NCJ1 209 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 SH2D1AO60880 128 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 MT-ND4LP03901 98 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 CRIP1P50238 77 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 BTN1A1Q13410 526 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 FAM231DQ6ZW35 169 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 Q8N1Y9 231 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 C15orf54Q8N8G6 183 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 DAZAP1Q96EP5 407 aaKnown RBP10.79□□□□□ -0.68
VRK3-212ENST00000596814 SRD5A3Q9H8P0 318 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
VRK3-212ENST00000596814 PFN1P07737 140 aaKnown RBP10.78□□□□□ -0.68
VRK3-212ENST00000596814 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
VRK3-212ENST00000596814 FXYD7P58549 80 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 KIR3DS1Q14943 382 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 OR10G8Q8NGN5 311 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 C7orf71A4D174 169 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 PPP1R2P9O14990 202 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 P01737 135 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 RPL35AP18077 110 aaKnown RBP10.78□□□□□ -0.68
VRK3-212ENST00000596814 NUTF2P61970 127 aaKnown RBP10.78□□□□□ -0.68
VRK3-212ENST00000596814 GFI1BQ5VTD9 330 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 NUDT10Q8NFP7 164 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 ANAPC16Q96DE5 110 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 NUDT11Q96G61 164 aa10.78□□□□□ -0.68
VRK3-212ENST00000596814 A0A087WWC5 75 aa10.77□□□□□ -0.69
VRK3-212ENST00000596814 TRAV21A0A0B4J279 112 aa10.77□□□□□ -0.69
VRK3-212ENST00000596814 ZNF705GA8MUZ8 300 aaPredicted RBP10.77□□□□□ -0.69
VRK3-212ENST00000596814 H7BYZ3 331 aa10.77□□□□□ -0.69
VRK3-212ENST00000596814 Q6AWC8 147 aa10.77□□□□□ -0.69
VRK3-212ENST00000596814 CTDSP1Q9GZU7 261 aa10.77□□□□□ -0.69
VRK3-212ENST00000596814 GATCO43716 136 aaKnown RBP10.76□□□□□ -0.69
VRK3-212ENST00000596814 AMBPP02760 352 aa10.76□□□□□ -0.69
VRK3-212ENST00000596814 V9GYV3 84 aa10.76□□□□□ -0.69
VRK3-212ENST00000596814 TRAV12-3A0A0B4J271 114 aa10.75□□□□□ -0.69
VRK3-212ENST00000596814 CRXO43186 299 aaPredicted RBP10.75□□□□□ -0.69
VRK3-212ENST00000596814 MORN3Q6PF18 240 aaPredicted RBP10.75□□□□□ -0.69
VRK3-212ENST00000596814 RPP21Q9H633 154 aaKnown RBP10.75□□□□□ -0.69
VRK3-212ENST00000596814 INSP01308 110 aa10.75□□□□□ -0.69
VRK3-212ENST00000596814 Q6ZQT7 251 aa10.75□□□□□ -0.69
VRK3-212ENST00000596814 ORM1P02763 201 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 RPL19P84098 196 aaKnown RBP10.74□□□□□ -0.69
VRK3-212ENST00000596814 CT83Q5H943 113 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 OR2D3Q8NGH3 330 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 TUBA4BQ9H853 241 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 TMEM242Q9NWH2 141 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 XCL2Q9UBD3 114 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
VRK3-212ENST00000596814 MGAM2Q2M2H8 2515 aa10.73□□□□□ -0.69
VRK3-212ENST00000596814 LOC102724200A0A096LPH7 203 aaPredicted RBP10.73□□□□□ -0.69
VRK3-212ENST00000596814 TMEM189A5PLL7 270 aa10.73□□□□□ -0.69
VRK3-212ENST00000596814 SCO1O75880 301 aa10.73□□□□□ -0.69
VRK3-212ENST00000596814 CA1P00915 261 aaPredicted RBP10.73□□□□□ -0.69
VRK3-212ENST00000596814 IGHV4-30-4P0DP06 118 aa10.73□□□□□ -0.69
VRK3-212ENST00000596814 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
VRK3-212ENST00000596814 C11orf21Q9P2W6 132 aa10.73□□□□□ -0.69
VRK3-212ENST00000596814 ZNF324O75467 553 aaPredicted RBP10.72□□□□□ -0.69
VRK3-212ENST00000596814 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 TMSB15BA0A087X1C1 80 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
VRK3-212ENST00000596814 RBMY1A1P0DJD3 496 aaKnown RBP10.72□□□□□ -0.69
VRK3-212ENST00000596814 RBMY1CP0DJD4 496 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 RBMY1FQ15415 496 aaKnown RBP10.72□□□□□ -0.69
VRK3-212ENST00000596814 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 KPRPQ5T749 579 aaPredicted RBP10.72□□□□□ -0.69
VRK3-212ENST00000596814 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 IL36BQ9NZH7 164 aa10.72□□□□□ -0.69
VRK3-212ENST00000596814 IGKV3D-20A0A0C4DH25 116 aa10.71□□□□□ -0.69
VRK3-212ENST00000596814 XKRY2A2RUG3 117 aa10.71□□□□□ -0.69
VRK3-212ENST00000596814 A8MWL6 223 aa10.71□□□□□ -0.69
VRK3-212ENST00000596814 RPS20P60866 119 aaKnown RBP10.71□□□□□ -0.69
VRK3-212ENST00000596814 TMEM88Q6PEY1 159 aa10.71□□□□□ -0.69
VRK3-212ENST00000596814 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
VRK3-212ENST00000596814 CBLN2Q8IUK8 224 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms