RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 H3BNG1 76 aa9.04□□□□□ -0.96
LIG1-212ENST00000596549 RGS13O14921 159 aa9.04□□□□□ -0.96
LIG1-212ENST00000596549 HMGB3O15347 200 aaKnown RBP9.04□□□□□ -0.96
LIG1-212ENST00000596549 ZNF266Q14584 549 aa9.04□□□□□ -0.96
LIG1-212ENST00000596549 ACOT6Q3I5F7 207 aaPredicted RBP9.04□□□□□ -0.96
LIG1-212ENST00000596549 Q5BKY6 102 aa9.04□□□□□ -0.96
LIG1-212ENST00000596549 C1orf134Q5TEV5 83 aa9.04□□□□□ -0.96
LIG1-212ENST00000596549 AQP10Q96PS8 301 aa9.04□□□□□ -0.96
LIG1-212ENST00000596549 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
LIG1-212ENST00000596549 TRGV2A0A075B6R0 118 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 A0A096LPF7 62 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 CSN1S1P47710 185 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 MUC21Q5SSG8 566 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 Q6AWC8 147 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 HSD17B11Q8NBQ5 300 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 HYLS1Q96M11 299 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
LIG1-212ENST00000596549 ARL14EPLP0DKL9 152 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 GNG5P63218 68 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 TNP2Q05952 138 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 ZNF415Q09FC8 603 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 ESRGQ1W209 222 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 SOHLH1Q5JUK2 328 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 PQLC2Q6ZP29 291 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 OR10G4Q8NGN3 311 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 OR10G9Q8NGN4 311 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 OR10G7Q8NGN6 311 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 OR2G3Q8NGZ4 309 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 ST6GAL2Q96JF0 529 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 ARPC5LQ9BPX5 153 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 UPK3BQ9BT76 320 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 MED28Q9H204 178 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 SH3BGRL3Q9H299 93 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 PCLOQ9Y6V0 5065 aa9.02□□□□□ -0.97
LIG1-212ENST00000596549 TRAV8-1A0A0A6YYK1 113 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 PGPA6NDG6 321 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 F6UZH7 168 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 ATP6V0CP27449 155 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 CDC34P49427 236 aaPredicted RBP9.01□□□□□ -0.97
LIG1-212ENST00000596549 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 ZNF575Q86XF7 245 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 C6orf223Q8N319 242 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 TMED6Q8WW62 240 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 TVP23CQ96ET8 276 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 PSMG3Q9BT73 122 aaPredicted RBP9.01□□□□□ -0.97
LIG1-212ENST00000596549 MDFICQ9P1T7 246 aa9.01□□□□□ -0.97
LIG1-212ENST00000596549 MRPS16Q9Y3D3 137 aaKnown RBP9.01□□□□□ -0.97
LIG1-212ENST00000596549 G3V3Q6 166 aa9□□□□□ -0.97
LIG1-212ENST00000596549 GIPP09681 153 aaPredicted RBP9□□□□□ -0.97
LIG1-212ENST00000596549 STAG3L2P0CL84 134 aa9□□□□□ -0.97
LIG1-212ENST00000596549 STAG3L3P0CL85 134 aa9□□□□□ -0.97
LIG1-212ENST00000596549 Q9H8V8 135 aa9□□□□□ -0.97
LIG1-212ENST00000596549 TMEM183BQ1AE95 376 aa8.99□□□□□ -0.97
LIG1-212ENST00000596549 TMEM183AQ8IXX5 376 aa8.99□□□□□ -0.97
LIG1-212ENST00000596549 CMTM2Q8TAZ6 248 aa8.99□□□□□ -0.97
LIG1-212ENST00000596549 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
LIG1-212ENST00000596549 GGTLC3B5MD39 225 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 CRYBA4P53673 196 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 FHL2Q14192 279 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 TDRG1Q3Y452 100 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 FAM74A1Q5RGS3 127 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 RAB24Q969Q5 203 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 NAGKQ9UJ70 344 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 TNFSF18Q9UNG2 199 aa8.98□□□□□ -0.97
LIG1-212ENST00000596549 TRGV11A0A075B6L2 103 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 TYMSP04818 313 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 SFTA3P0C7M3 94 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 MED14OSP0DP75 135 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 GCHFRP30047 84 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 RPL7L1Q6DKI1 246 aaKnown RBP8.97□□□□□ -0.97
LIG1-212ENST00000596549 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 ASB13Q8WXK3 278 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 ZNF479Q96JC4 524 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 SGK494Q96LW2 274 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 PRO0255Q9UI72 69 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 ICOSQ9Y6W8 199 aa8.97□□□□□ -0.97
LIG1-212ENST00000596549 FXYD6-FXYD2A0A087WZ82 144 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 IGHV3-16A0A0C4DH30 117 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 PAX4O43316 350 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 TCRAP04437 139 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 SERF2P84101 59 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 ZNF726P1Q15940 193 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 TTC32Q5I0X7 151 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 C5orf17Q8NAS9 161 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 C8orf49Q96NF6 230 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 TREM1Q9NP99 234 aa8.96□□□□□ -0.98
LIG1-212ENST00000596549 RYR1P21817 5038 aa8.95□□□□□ -0.98
LIG1-212ENST00000596549 TRAV21A0A0B4J279 112 aa8.95□□□□□ -0.98
LIG1-212ENST00000596549 GNRH2O43555 120 aa8.95□□□□□ -0.98
LIG1-212ENST00000596549 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
LIG1-212ENST00000596549 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
LIG1-212ENST00000596549 OR2T35Q8NGX2 323 aa8.95□□□□□ -0.98
LIG1-212ENST00000596549 RASL10AQ92737 203 aa8.95□□□□□ -0.98
LIG1-212ENST00000596549 C11orf21Q9P2W6 132 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms