RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 EPDR1Q9UM22 224 aa12.31□□□□□ -0.44
SHKBP1-212ENST00000596163 TENM2Q9NT68 2774 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 GNG5P63218 68 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 ANXA2RQ3ZCQ2 193 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 LGALSLQ3ZCW2 172 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 TMPRSS5Q9H3S3 457 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
SHKBP1-212ENST00000596163 IGHV4-4A0A075B6R2 117 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 IGHV1OR15-1A0A075B7D0 117 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 GGTLC3B5MD39 225 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 IFNA7P01567 189 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 CYB561D1Q8N8Q1 229 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 SFT2D1Q8WV19 159 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 MBD3L1Q8WWY6 194 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 LINC00476Q8WZB0 136 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 ATG101Q9BSB4 218 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 TREM1Q9NP99 234 aa12.29□□□□□ -0.44
SHKBP1-212ENST00000596163 DYNC2H1Q8NCM8 4307 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 LY6G6CO95867 125 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 HTN3P15516 51 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 PPT1P50897 306 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 RAB5CP51148 216 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 UBE2G2P60604 165 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 PRR9Q5T870 116 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 Q6AWC8 147 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 NDUFAF3Q9BU61 184 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
SHKBP1-212ENST00000596163 TRAV8-1A0A0A6YYK1 113 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 FAM74A7A6NL05 159 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 F6UZH7 168 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 ATP5G1P05496 136 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 ATP5G3P48201 142 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 FHITP49789 147 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 LGALS9CQ6DKI2 356 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 SLC51BQ86UW2 128 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 TMEM75Q8N9X5 138 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 HIST1H2BAQ96A08 127 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 PSG8Q9UQ74 426 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 ARL2-SNX15V9GYD0 113 aa12.27□□□□□ -0.45
SHKBP1-212ENST00000596163 TRAV21A0A0B4J279 112 aa12.26□□□□□ -0.45
SHKBP1-212ENST00000596163 H2AFB1P0C5Y9 115 aa12.26□□□□□ -0.45
SHKBP1-212ENST00000596163 FLI1Q01543 452 aaPredicted RBP12.26□□□□□ -0.45
SHKBP1-212ENST00000596163 SAPCD1Q5SSQ6 148 aa12.26□□□□□ -0.45
SHKBP1-212ENST00000596163 IBA57Q5T440 356 aaKnown RBP12.26□□□□□ -0.45
SHKBP1-212ENST00000596163 TCEAL7Q9BRU2 100 aa12.26□□□□□ -0.45
SHKBP1-212ENST00000596163 TEX46H3BTG2 121 aa12.25□□□□□ -0.45
SHKBP1-212ENST00000596163 ZFP69Q49AA0 526 aa12.25□□□□□ -0.45
SHKBP1-212ENST00000596163 CST9LP1Q5W188 147 aa12.25□□□□□ -0.45
SHKBP1-212ENST00000596163 SGK494Q96LW2 274 aa12.25□□□□□ -0.45
SHKBP1-212ENST00000596163 GSN-AS1Q9NRJ2 163 aa12.25□□□□□ -0.45
SHKBP1-212ENST00000596163 RYR3Q15413 4870 aa12.25□□□□□ -0.45
SHKBP1-212ENST00000596163 PLECQ15149 4684 aaKnown RBP12.24□□□□□ -0.45
SHKBP1-212ENST00000596163 TRGV11A0A075B6L2 103 aa12.24□□□□□ -0.45
SHKBP1-212ENST00000596163 PEX7O00628 323 aa12.24□□□□□ -0.45
SHKBP1-212ENST00000596163 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
SHKBP1-212ENST00000596163 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
SHKBP1-212ENST00000596163 F5H768 121 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 TCL1AP56279 114 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 SMUG1Q53HV7 270 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 C11orf72Q8NBR9 251 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 TVP23CQ96ET8 276 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 KCNS1Q96KK3 526 aa12.23□□□□□ -0.45
SHKBP1-212ENST00000596163 GAGE12BA1L429 117 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 GAGE7O76087 117 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 IGLV2-11P01706 119 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 GAGE12FP0CL80 117 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 GAGE12GP0CL81 117 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 GAGE12IP0CL82 117 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 Q6ZQT7 251 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 NAGKQ9UJ70 344 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
SHKBP1-212ENST00000596163 TRGV2A0A075B6R0 118 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 A0A1B0GV50 99 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 PAGE4O60829 102 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 SULT1A2P50226 295 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 LGALS9BQ3B8N2 356 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 TDRG1Q3Y452 100 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 C9orf62Q8N4C0 152 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 C15orf53Q8NAA6 179 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 SPXQ9BT56 116 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.45
SHKBP1-212ENST00000596163 TRGV1A0A0A0MS02 117 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 SPINK4O60575 86 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 GCGP01275 180 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 P0DMU3 169 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 FAM231AP0DMU4 169 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 FAM231CP0DMU5 169 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 UBE2G1P62253 170 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 TMEM183BQ1AE95 376 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 TMEM88Q6PEY1 159 aa12.2□□□□□ -0.46
SHKBP1-212ENST00000596163 TMEM183AQ8IXX5 376 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms