RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 C20orf144Q9BQM9 153 aa11.31□□□□□ -0.6
USHBP1-205ENST00000595993 YTHDF2Q9Y5A9 579 aaKnown RBP11.31□□□□□ -0.6
USHBP1-205ENST00000595993 C7orf71A4D174 169 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 TPT1P13693 172 aaKnown RBP11.3□□□□□ -0.6
USHBP1-205ENST00000595993 TAS2R60P59551 318 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 FAM74A1Q5RGS3 127 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 FAM222AQ5U5X8 452 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 Q6ZQT7 251 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 CMTM2Q8TAZ6 248 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 NDUFAF3Q9BU61 184 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 DKK2Q9UBU2 259 aa11.3□□□□□ -0.6
USHBP1-205ENST00000595993 HSPG2P98160 4391 aa11.29□□□□□ -0.6
USHBP1-205ENST00000595993 MUC4Q99102 2169 aa11.29□□□□□ -0.6
USHBP1-205ENST00000595993 H7BYZ3 331 aa11.29□□□□□ -0.6
USHBP1-205ENST00000595993 C9orf62Q8N4C0 152 aa11.29□□□□□ -0.6
USHBP1-205ENST00000595993 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
USHBP1-205ENST00000595993 NMBP08949 121 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 SPART-AS1P0CW21 52 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 HTN1P15515 57 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
USHBP1-205ENST00000595993 UBE2G2P60604 165 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 EIF5AP63241 154 aaKnown RBP11.28□□□□□ -0.6
USHBP1-205ENST00000595993 Q6ZR54 194 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 ARL6IP6Q8N6S5 226 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
USHBP1-205ENST00000595993 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
USHBP1-205ENST00000595993 TRBV7-9A0A0J9YWB2 115 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 A0A1W2PRE2 83 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 TCRAP04437 139 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 GPX1P07203 203 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
USHBP1-205ENST00000595993 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 FAM210BQ96KR6 192 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
USHBP1-205ENST00000595993 ZFP69Q49AA0 526 aa11.26□□□□□ -0.61
USHBP1-205ENST00000595993 TMEM263Q8WUH6 116 aaKnown RBP11.26□□□□□ -0.61
USHBP1-205ENST00000595993 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
USHBP1-205ENST00000595993 C16orf74Q96GX8 76 aa11.26□□□□□ -0.61
USHBP1-205ENST00000595993 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
USHBP1-205ENST00000595993 A0A1B0GV50 99 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 FAM74A7A6NL05 159 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 M0R2N4 97 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 PYGO2Q9BRQ0 406 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 EPDR1Q9UM22 224 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 LENEPQ9Y5L5 61 aa11.25□□□□□ -0.61
USHBP1-205ENST00000595993 TEX48A0A1B0GUV7 120 aa11.24□□□□□ -0.61
USHBP1-205ENST00000595993 IGLV2-11P01706 119 aa11.24□□□□□ -0.61
USHBP1-205ENST00000595993 SLC51BQ86UW2 128 aa11.24□□□□□ -0.61
USHBP1-205ENST00000595993 SFT2D1Q8WV19 159 aa11.24□□□□□ -0.61
USHBP1-205ENST00000595993 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
USHBP1-205ENST00000595993 SERTM2A0A1B0GWG4 89 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 F6UZH7 168 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
USHBP1-205ENST00000595993 ZNF493Q6ZR52 646 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 CYB561D1Q8N8Q1 229 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 KRTAP4-5Q9BYR2 181 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 TP53TG3Q9ULZ0 132 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 LRP1BQ9NZR2 4599 aa11.23□□□□□ -0.61
USHBP1-205ENST00000595993 LYRM9A8MSI8 78 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 RNF212Q495C1 297 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 Q6AWC8 147 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 CCDC28AQ8IWP9 274 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 LINC00479Q96M42 142 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 NOP10Q9NPE3 64 aaKnown RBP11.22□□□□□ -0.61
USHBP1-205ENST00000595993 PSG8Q9UQ74 426 aa11.22□□□□□ -0.61
USHBP1-205ENST00000595993 NACAE9PAV3 2078 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 CBY3A6NI87 242 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 PEX7O00628 323 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 IFNA7P01567 189 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 ATP5G3P48201 142 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 SULT1A2P50226 295 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 DAD1P61803 113 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 MUC21Q5SSG8 566 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 EIF4E3Q8N5X7 224 aaKnown RBP11.21□□□□□ -0.61
USHBP1-205ENST00000595993 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 C8orf49Q96NF6 230 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 TREM1Q9NP99 234 aa11.21□□□□□ -0.61
USHBP1-205ENST00000595993 TIMM8BQ9Y5J9 83 aaPredicted RBP11.21□□□□□ -0.61
USHBP1-205ENST00000595993 IGHV1OR15-1A0A075B7D0 117 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 K7EQM0 130 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 RGS13O14921 159 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 PAGE4O60829 102 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 CCL20P78556 96 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 FLI1Q01543 452 aaPredicted RBP11.2□□□□□ -0.62
USHBP1-205ENST00000595993 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms