RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 TP53TG3Q9ULZ0 132 aa9.81□□□□□ -0.84
SHKBP1-207ENST00000595631 PAGE4O60829 102 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 IFNA7P01567 189 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 ATP5G3P48201 142 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 MUC21Q5SSG8 566 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 CCDC28AQ8IWP9 274 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 CYB561D1Q8N8Q1 229 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 ATG101Q9BSB4 218 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 PSG8Q9UQ74 426 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
SHKBP1-207ENST00000595631 DEFB131BA0A096LNP1 70 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 TRAV10A0A0B4J240 114 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 CBY3A6NI87 242 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 PEX7O00628 323 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 DEFB130BP0DP73 79 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 DEFB130AP0DP74 79 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 HTN3P15516 51 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 SULT1A2P50226 295 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 DAD1P61803 113 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 CCL20P78556 96 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 CST9LP1Q5W188 147 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 PRNTQ86SH4 94 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 EIF4E3Q8N5X7 224 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 C2CD4CQ8TF44 421 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 TREM1Q9NP99 234 aa9.79□□□□□ -0.84
SHKBP1-207ENST00000595631 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 LCE6AA0A183 80 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 SERTM2A0A1B0GWG4 89 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 IGLL5B9A064 214 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 C11orf94C9JXX5 98 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 K7EQM0 130 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 RGS13O14921 159 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 Q6AWC8 147 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 EIF5AL1Q6IS14 154 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 TMEM75Q8N9X5 138 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 C11orf72Q8NBR9 251 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 LINC00467Q9BRT7 94 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-207ENST00000595631 ALMS1Q8TCU4 4167 aa9.77□□□□□ -0.85
SHKBP1-207ENST00000595631 TEX48A0A1B0GUV7 120 aa9.77□□□□□ -0.85
SHKBP1-207ENST00000595631 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.85
SHKBP1-207ENST00000595631 NAGKQ9UJ70 344 aa9.77□□□□□ -0.85
SHKBP1-207ENST00000595631 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
SHKBP1-207ENST00000595631 SNURFLB1AK76 121 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 RAB5CP51148 216 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 ANXA2RQ3ZCQ2 193 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 ALKAL2Q6UX46 152 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 Q86TA4 180 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 NDFIP1Q9BT67 221 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 NKX6-2Q9C056 277 aaPredicted RBP9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 ARL2-SNX15V9GYD0 113 aa9.76□□□□□ -0.85
SHKBP1-207ENST00000595631 IGHV4-4A0A075B6R2 117 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 GCGP01275 180 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 Q6ZTI0 123 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 ZNF680Q8NEM1 530 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 HIST1H2BAQ96A08 127 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 GNG13Q9P2W3 67 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 C11orf21Q9P2W6 132 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 APLNQ9ULZ1 77 aa9.75□□□□□ -0.85
SHKBP1-207ENST00000595631 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 GAGE12BA1L429 117 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 GAGE7O76087 117 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 GAGE12FP0CL80 117 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 GAGE12GP0CL81 117 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 GAGE12IP0CL82 117 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 PPT1P50897 306 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 TCL1AP56279 114 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 TMEM183BQ1AE95 376 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 FAM159AQ6UWV7 190 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 MDFICQ9P1T7 246 aa9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 KMT2CQ8NEZ4 4911 aaKnown RBP9.74□□□□□ -0.85
SHKBP1-207ENST00000595631 PLECQ15149 4684 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 LYSTQ99698 3801 aa9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 FBLL1A6NHQ2 334 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 GNRH2O43555 120 aa9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 AKR1C3P42330 323 aa9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 DAZ2Q13117 558 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 LINC00476Q8WZB0 136 aa9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 DNAH1Q9P2D7 4330 aa9.73□□□□□ -0.85
SHKBP1-207ENST00000595631 NACAE9PAV3 2078 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 TRGV1A0A0A0MS02 117 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 LY6G6CO95867 125 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 TYMSP04818 313 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 UBE2G1P62253 170 aa9.72□□□□□ -0.85
SHKBP1-207ENST00000595631 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms