RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 RGS13O14921 159 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 GAGE7O76087 117 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 ARL6IP6Q8N6S5 226 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 TMED6Q8WW62 240 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 RAB24Q969Q5 203 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 GNPNAT1Q96EK6 184 aaPredicted RBP10.6□□□□□ -0.71
TRIM28-205ENST00000595028 GSN-AS1Q9NRJ2 163 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
TRIM28-205ENST00000595028 DNAH11Q96DT5 4516 aa10.59□□□□□ -0.71
TRIM28-205ENST00000595028 IGHV1OR15-1A0A075B7D0 117 aa10.59□□□□□ -0.71
TRIM28-205ENST00000595028 TCL1AP56279 114 aa10.59□□□□□ -0.71
TRIM28-205ENST00000595028 RNF212Q495C1 297 aa10.59□□□□□ -0.71
TRIM28-205ENST00000595028 Q6ZQT7 251 aa10.59□□□□□ -0.71
TRIM28-205ENST00000595028 Q6ZTI0 123 aa10.59□□□□□ -0.71
TRIM28-205ENST00000595028 ARPC5O15511 151 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 GCHFRP30047 84 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 IBA57Q5T440 356 aaKnown RBP10.58□□□□□ -0.72
TRIM28-205ENST00000595028 Q6AWC8 147 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 SSX7Q7RTT5 188 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 SUN5Q8TC36 379 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 ARPC5LQ9BPX5 153 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 ACTR3CQ9C0K3 210 aaPredicted RBP10.58□□□□□ -0.72
TRIM28-205ENST00000595028 TMPRSS5Q9H3S3 457 aa10.58□□□□□ -0.72
TRIM28-205ENST00000595028 HERC1Q15751 4861 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 MED14OSP0DP75 135 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 HOXA5P20719 270 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 GNG5P63218 68 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 C18orf15Q96N68 181 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 KRTAP4-5Q9BYR2 181 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 KLF12Q9Y4X4 402 aa10.57□□□□□ -0.72
TRIM28-205ENST00000595028 TRGV1A0A0A0MS02 117 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 SPINK4O60575 86 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 NUDT3O95989 172 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 CXorf1O96002 111 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 OR5I1Q13606 314 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 C5orf17Q8NAS9 161 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
TRIM28-205ENST00000595028 TRGV2A0A075B6R0 118 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 TRAV26-1A0A087WT03 109 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 TAAR5O14804 337 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 FAM3BP58499 235 aaPredicted RBP10.55□□□□□ -0.72
TRIM28-205ENST00000595028 ZNF415Q09FC8 603 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 CYTL1Q9NRR1 136 aa10.55□□□□□ -0.72
TRIM28-205ENST00000595028 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
TRIM28-205ENST00000595028 CTXND1A0A1B0GTU2 59 aa10.54□□□□□ -0.72
TRIM28-205ENST00000595028 M0R2N4 97 aa10.54□□□□□ -0.72
TRIM28-205ENST00000595028 TCRAP04437 139 aa10.54□□□□□ -0.72
TRIM28-205ENST00000595028 ZNF345Q14585 488 aa10.54□□□□□ -0.72
TRIM28-205ENST00000595028 LGALS9BQ3B8N2 356 aa10.54□□□□□ -0.72
TRIM28-205ENST00000595028 PKD1P98161 4303 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 A0A0J9YY99 117 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 F6UZH7 168 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 AKR1C8PQ5T2L2 129 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 Q6ZR54 194 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 IQCF2Q8IXL9 164 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 TREM1Q9NP99 234 aa10.53□□□□□ -0.72
TRIM28-205ENST00000595028 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
TRIM28-205ENST00000595028 HSPG2P98160 4391 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 H3BNG1 76 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 TMEM183BQ1AE95 376 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 FAM159AQ6UWV7 190 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 Q6ZNX1 250 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 TMEM183AQ8IXX5 376 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 NDFIP1Q9BT67 221 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 NAGKQ9UJ70 344 aa10.52□□□□□ -0.73
TRIM28-205ENST00000595028 hCG_2014768A0A024R1R8 64 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 A0A1W2PRE2 83 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 K7EQM0 130 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 CCL18P55774 89 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 SUMO1P63165 101 aaKnown RBP10.51□□□□□ -0.73
TRIM28-205ENST00000595028 LINC00336Q6ZUF6 198 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 KCNRGQ8N5I3 272 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 CYB561D1Q8N8Q1 229 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 SGK494Q96LW2 274 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 LINC00588Q9Y4M8 146 aa10.51□□□□□ -0.73
TRIM28-205ENST00000595028 HMSDA8MTL9 139 aa10.5□□□□□ -0.73
TRIM28-205ENST00000595028 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
TRIM28-205ENST00000595028 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
TRIM28-205ENST00000595028 OR11H4Q8NGC9 324 aa10.5□□□□□ -0.73
TRIM28-205ENST00000595028 ZNRF2Q8NHG8 242 aa10.5□□□□□ -0.73
TRIM28-205ENST00000595028 VSIG2Q96IQ7 327 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms