RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 AZU1P20160 251 aa18.43■□□□□ 0.54
TRIM28-204ENST00000594806 C12orf74Q32Q52 190 aa18.43■□□□□ 0.54
TRIM28-204ENST00000594806 RNASE8Q8TDE3 154 aaKnown RBP18.43■□□□□ 0.54
TRIM28-204ENST00000594806 HIST1H2BAQ96A08 127 aa18.43■□□□□ 0.54
TRIM28-204ENST00000594806 NDFIP1Q9BT67 221 aa18.43■□□□□ 0.54
TRIM28-204ENST00000594806 TRAV1-1A0A0B4J248 108 aa18.42■□□□□ 0.54
TRIM28-204ENST00000594806 TEX46H3BTG2 121 aa18.42■□□□□ 0.54
TRIM28-204ENST00000594806 PRM2P04554 102 aa18.42■□□□□ 0.54
TRIM28-204ENST00000594806 TMEM75Q8N9X5 138 aa18.42■□□□□ 0.54
TRIM28-204ENST00000594806 F6UZH7 168 aa18.41■□□□□ 0.54
TRIM28-204ENST00000594806 ANXA2RQ3ZCQ2 193 aa18.41■□□□□ 0.54
TRIM28-204ENST00000594806 Q6AWC8 147 aa18.41■□□□□ 0.54
TRIM28-204ENST00000594806 TIMM8BQ9Y5J9 83 aaPredicted RBP18.41■□□□□ 0.54
TRIM28-204ENST00000594806 TRAV8-1A0A0A6YYK1 113 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 TRAV10A0A0B4J240 114 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 PLAC8L1A1L4L8 177 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 PRR9Q5T870 116 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 Q6ZTC4 211 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 EIF4E3Q8N5X7 224 aaKnown RBP18.4■□□□□ 0.54
TRIM28-204ENST00000594806 ZNF680Q8NEM1 530 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 TREM1Q9NP99 234 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 PSG8Q9UQ74 426 aa18.4■□□□□ 0.54
TRIM28-204ENST00000594806 CSMD3Q7Z407 3707 aa18.39■□□□□ 0.54
TRIM28-204ENST00000594806 RGS13O14921 159 aa18.39■□□□□ 0.53
TRIM28-204ENST00000594806 FLI1Q01543 452 aaPredicted RBP18.39■□□□□ 0.53
TRIM28-204ENST00000594806 CST9LP1Q5W188 147 aa18.39■□□□□ 0.53
TRIM28-204ENST00000594806 PEX7O00628 323 aa18.38■□□□□ 0.53
TRIM28-204ENST00000594806 SAPCD1Q5SSQ6 148 aa18.38■□□□□ 0.53
TRIM28-204ENST00000594806 IGHV1OR15-1A0A075B7D0 117 aa18.37■□□□□ 0.53
TRIM28-204ENST00000594806 PAGE4O60829 102 aa18.37■□□□□ 0.53
TRIM28-204ENST00000594806 IGLV2-11P01706 119 aa18.37■□□□□ 0.53
TRIM28-204ENST00000594806 DAD1P61803 113 aa18.37■□□□□ 0.53
TRIM28-204ENST00000594806 C2CD4CQ8TF44 421 aa18.37■□□□□ 0.53
TRIM28-204ENST00000594806 TVP23CQ96ET8 276 aa18.37■□□□□ 0.53
TRIM28-204ENST00000594806 CBY3A6NI87 242 aa18.36■□□□□ 0.53
TRIM28-204ENST00000594806 SNURFLB1AK76 121 aa18.36■□□□□ 0.53
TRIM28-204ENST00000594806 TCTAP57738 103 aa18.36■□□□□ 0.53
TRIM28-204ENST00000594806 MANBALQ9NQG1 85 aa18.36■□□□□ 0.53
TRIM28-204ENST00000594806 TRAV21A0A0B4J279 112 aa18.35■□□□□ 0.53
TRIM28-204ENST00000594806 IBA57Q5T440 356 aaKnown RBP18.35■□□□□ 0.53
TRIM28-204ENST00000594806 SGK494Q96LW2 274 aa18.35■□□□□ 0.53
TRIM28-204ENST00000594806 DEFB131BA0A096LNP1 70 aa18.34■□□□□ 0.53
TRIM28-204ENST00000594806 A0A1B0GV50 99 aa18.34■□□□□ 0.53
TRIM28-204ENST00000594806 DAZ2Q13117 558 aaKnown RBP18.34■□□□□ 0.53
TRIM28-204ENST00000594806 ZNF767PQ75MW2 155 aa18.34■□□□□ 0.53
TRIM28-204ENST00000594806 PRNTQ86SH4 94 aa18.34■□□□□ 0.53
TRIM28-204ENST00000594806 STARD9Q9P2P6 4700 aa18.34■□□□□ 0.53
TRIM28-204ENST00000594806 NKX2-5P52952 324 aaPredicted RBP18.33■□□□□ 0.52
TRIM28-204ENST00000594806 FMC1Q96HJ9 113 aa18.33■□□□□ 0.52
TRIM28-204ENST00000594806 TXNDC17Q9BRA2 123 aa18.33■□□□□ 0.52
TRIM28-204ENST00000594806 NOP10Q9NPE3 64 aaKnown RBP18.33■□□□□ 0.52
TRIM28-204ENST00000594806 ATP5G3P48201 142 aa18.32■□□□□ 0.52
TRIM28-204ENST00000594806 TDRG1Q3Y452 100 aa18.32■□□□□ 0.52
TRIM28-204ENST00000594806 SMUG1Q53HV7 270 aa18.32■□□□□ 0.52
TRIM28-204ENST00000594806 FAM159AQ6UWV7 190 aa18.32■□□□□ 0.52
TRIM28-204ENST00000594806 C11orf72Q8NBR9 251 aa18.32■□□□□ 0.52
TRIM28-204ENST00000594806 KLF12Q9Y4X4 402 aa18.32■□□□□ 0.52
TRIM28-204ENST00000594806 TRBV6-1A0A0K0K1D8 114 aa18.31■□□□□ 0.52
TRIM28-204ENST00000594806 S100A9P06702 114 aaKnown RBP18.31■□□□□ 0.52
TRIM28-204ENST00000594806 LINC00479Q96M42 142 aa18.31■□□□□ 0.52
TRIM28-204ENST00000594806 ZFP30Q9Y2G7 519 aa18.31■□□□□ 0.52
TRIM28-204ENST00000594806 TENM2Q9NT68 2774 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 TRAV34A0A0B4J273 112 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 TCL1AP56279 114 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 UBE2G1P62253 170 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 Q6ZQT7 251 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 LINC00612Q8N6U2 182 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 FAM210BQ96KR6 192 aa18.3■□□□□ 0.52
TRIM28-204ENST00000594806 TRGV11A0A075B6L2 103 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 DEFB130BP0DP73 79 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 DEFB130AP0DP74 79 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 AKR1C3P42330 323 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 BLOC1S1P78537 153 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 CCL20P78556 96 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 KCNS1Q96KK3 526 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 C8orf49Q96NF6 230 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 GSN-AS1Q9NRJ2 163 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 GNG13Q9P2W3 67 aa18.29■□□□□ 0.52
TRIM28-204ENST00000594806 GCGP01275 180 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 IFNA1P01562 189 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 PFN1P07737 140 aaKnown RBP18.28■□□□□ 0.52
TRIM28-204ENST00000594806 ZNF415Q09FC8 603 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 TMEM183BQ1AE95 376 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 MUC21Q5SSG8 566 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 ALKAL2Q6UX46 152 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 Q86TA4 180 aa18.28■□□□□ 0.52
TRIM28-204ENST00000594806 LCE6AA0A183 80 aa18.27■□□□□ 0.52
TRIM28-204ENST00000594806 IGLL5B9A064 214 aa18.27■□□□□ 0.52
TRIM28-204ENST00000594806 TAGLN2P37802 199 aaKnown RBP18.27■□□□□ 0.52
TRIM28-204ENST00000594806 COX8CQ7Z4L0 72 aa18.27■□□□□ 0.52
TRIM28-204ENST00000594806 TP53TG3Q9ULZ0 132 aa18.27■□□□□ 0.52
TRIM28-204ENST00000594806 BOLA1Q9Y3E2 137 aa18.26■□□□□ 0.51
TRIM28-204ENST00000594806 ATP5G1P05496 136 aa18.25■□□□□ 0.51
TRIM28-204ENST00000594806 LGALS9BQ3B8N2 356 aa18.25■□□□□ 0.51
TRIM28-204ENST00000594806 SDF2L1Q9HCN8 221 aa18.25■□□□□ 0.51
TRIM28-204ENST00000594806 NAGKQ9UJ70 344 aa18.25■□□□□ 0.51
TRIM28-204ENST00000594806 IGHV4-4A0A075B6R2 117 aa18.24■□□□□ 0.51
TRIM28-204ENST00000594806 ZNF80P51504 273 aaPredicted RBP18.24■□□□□ 0.51
TRIM28-204ENST00000594806 TMEM183AQ8IXX5 376 aa18.24■□□□□ 0.51
TRIM28-204ENST00000594806 C18orf15Q96N68 181 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms