RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 ARPC5LQ9BPX5 153 aa11.07□□□□□ -0.64
LIG3-215ENST00000592690 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
LIG3-215ENST00000592690 TMEM167BQ9NRX6 74 aa11.07□□□□□ -0.64
LIG3-215ENST00000592690 TP53TG3Q9ULZ0 132 aa11.07□□□□□ -0.64
LIG3-215ENST00000592690 IGHV1OR15-1A0A075B7D0 117 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 GGTLC3B5MD39 225 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 F5H768 121 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 RGS13O14921 159 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 ANXA2RQ3ZCQ2 193 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 ARL6IP6Q8N6S5 226 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 ZNF680Q8NEM1 530 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 SGK494Q96LW2 274 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
LIG3-215ENST00000592690 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 GAGE7O76087 117 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 FGF8P55075 233 aaPredicted RBP11.05□□□□□ -0.64
LIG3-215ENST00000592690 DAZ2Q13117 558 aaKnown RBP11.05□□□□□ -0.64
LIG3-215ENST00000592690 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 Q6ZTI0 123 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 C5orf17Q8NAS9 161 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 TVP23CQ96ET8 276 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 TMPRSS5Q9H3S3 457 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 KLF12Q9Y4X4 402 aa11.05□□□□□ -0.64
LIG3-215ENST00000592690 TCRAP04437 139 aa11.04□□□□□ -0.64
LIG3-215ENST00000592690 P0DMU3 169 aa11.04□□□□□ -0.64
LIG3-215ENST00000592690 FAM231AP0DMU4 169 aa11.04□□□□□ -0.64
LIG3-215ENST00000592690 FAM231CP0DMU5 169 aa11.04□□□□□ -0.64
LIG3-215ENST00000592690 TCL1AP56279 114 aa11.04□□□□□ -0.64
LIG3-215ENST00000592690 SUMO1P63165 101 aaKnown RBP11.04□□□□□ -0.64
LIG3-215ENST00000592690 Q6AWC8 147 aa11.04□□□□□ -0.64
LIG3-215ENST00000592690 MUC4Q99102 2169 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 A0A0D9SG52 128 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 MAP1LC3B2A6NCE7 125 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 F6UZH7 168 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 BCL2L11O43521 198 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 UBE2G2P60604 165 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 MAP1LC3BQ9GZQ8 125 aa11.03□□□□□ -0.64
LIG3-215ENST00000592690 KANTRA0A1W2PQU2 76 aa11.02□□□□□ -0.65
LIG3-215ENST00000592690 A0A1W2PRE2 83 aa11.02□□□□□ -0.65
LIG3-215ENST00000592690 FHITP49789 147 aa11.02□□□□□ -0.65
LIG3-215ENST00000592690 IBA57Q5T440 356 aaKnown RBP11.02□□□□□ -0.65
LIG3-215ENST00000592690 Q6ZNX1 250 aa11.02□□□□□ -0.65
LIG3-215ENST00000592690 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.65
LIG3-215ENST00000592690 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.65
LIG3-215ENST00000592690 TREM1Q9NP99 234 aa11.02□□□□□ -0.65
LIG3-215ENST00000592690 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 SERTM2A0A1B0GWG4 89 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 SPINK4O60575 86 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 IGLV2-11P01706 119 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 HOXA5P20719 270 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 CYB561D1Q8N8Q1 229 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 C15orf53Q8NAA6 179 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 C8orf49Q96NF6 230 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
LIG3-215ENST00000592690 SEC11BP0C7V7 166 aa11□□□□□ -0.65
LIG3-215ENST00000592690 FLI1Q01543 452 aaPredicted RBP11□□□□□ -0.65
LIG3-215ENST00000592690 ZNF415Q09FC8 603 aa11□□□□□ -0.65
LIG3-215ENST00000592690 OR5I1Q13606 314 aa11□□□□□ -0.65
LIG3-215ENST00000592690 TMUB2Q71RG4 321 aa11□□□□□ -0.65
LIG3-215ENST00000592690 UBE2DNLQ8IWF7 75 aa11□□□□□ -0.65
LIG3-215ENST00000592690 ATG101Q9BSB4 218 aa11□□□□□ -0.65
LIG3-215ENST00000592690 MRPL16Q9NX20 251 aaKnown RBP11□□□□□ -0.65
LIG3-215ENST00000592690 MDFICQ9P1T7 246 aa11□□□□□ -0.65
LIG3-215ENST00000592690 PSG8Q9UQ74 426 aa11□□□□□ -0.65
LIG3-215ENST00000592690 TRGV2A0A075B6R0 118 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 FAM74A7A6NL05 159 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 K7EQM0 130 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 PFDN1O60925 122 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 NUDT3O95989 172 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 FAM159AQ6UWV7 190 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 PRNTQ86SH4 94 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 TMEM183AQ8IXX5 376 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 TMEM75Q8N9X5 138 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 NDFIP1Q9BT67 221 aa10.99□□□□□ -0.65
LIG3-215ENST00000592690 TRAV26-1A0A087WT03 109 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 TRAV21A0A0B4J279 112 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 ZNF80P51504 273 aaPredicted RBP10.98□□□□□ -0.65
LIG3-215ENST00000592690 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 FAM213BQ8TBF2 198 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 LINC00479Q96M42 142 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 C18orf15Q96N68 181 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 DNAH10Q8IVF4 4471 aa10.98□□□□□ -0.65
LIG3-215ENST00000592690 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
LIG3-215ENST00000592690 TRGV11A0A075B6L2 103 aa10.97□□□□□ -0.65
LIG3-215ENST00000592690 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
LIG3-215ENST00000592690 A0A0J9YY99 117 aa10.97□□□□□ -0.65
LIG3-215ENST00000592690 IFNA7P01567 189 aa10.97□□□□□ -0.65
LIG3-215ENST00000592690 LGALSLQ3ZCW2 172 aaPredicted RBP10.97□□□□□ -0.65
LIG3-215ENST00000592690 hCG_2014768A0A024R1R8 64 aa10.96□□□□□ -0.65
LIG3-215ENST00000592690 A0A1B0GV50 99 aa10.96□□□□□ -0.65
LIG3-215ENST00000592690 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
LIG3-215ENST00000592690 PEX7O00628 323 aa10.96□□□□□ -0.65
LIG3-215ENST00000592690 GNRH2O43555 120 aa10.96□□□□□ -0.65
LIG3-215ENST00000592690 GCGP01275 180 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms