RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 ZNF324O75467 553 aaPredicted RBP13.29□□□□□ -0.28
TCF3-216ENST00000592395 RNASE4P34096 147 aaKnown RBP13.29□□□□□ -0.28
TCF3-216ENST00000592395 FHITP49789 147 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 SUMO1P63165 101 aaKnown RBP13.29□□□□□ -0.28
TCF3-216ENST00000592395 PRR9Q5T870 116 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 CCDC28AQ8IWP9 274 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
TCF3-216ENST00000592395 C2CD4CQ8TF44 421 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 TMPRSS5Q9H3S3 457 aa13.29□□□□□ -0.28
TCF3-216ENST00000592395 LCE6AA0A183 80 aa13.28□□□□□ -0.28
TCF3-216ENST00000592395 LYRM9A8MSI8 78 aa13.28□□□□□ -0.28
TCF3-216ENST00000592395 TCRAP04437 139 aa13.28□□□□□ -0.28
TCF3-216ENST00000592395 DPPA3Q6W0C5 159 aa13.28□□□□□ -0.28
TCF3-216ENST00000592395 K7EQM0 130 aa13.27□□□□□ -0.29
TCF3-216ENST00000592395 FAM213BQ8TBF2 198 aa13.27□□□□□ -0.29
TCF3-216ENST00000592395 LINC00467Q9BRT7 94 aa13.27□□□□□ -0.29
TCF3-216ENST00000592395 DEFB131BA0A096LNP1 70 aa13.26□□□□□ -0.29
TCF3-216ENST00000592395 UBE2G2P60604 165 aa13.26□□□□□ -0.29
TCF3-216ENST00000592395 DAD1P61803 113 aa13.26□□□□□ -0.29
TCF3-216ENST00000592395 EIF5AL1Q6IS14 154 aaKnown RBP13.26□□□□□ -0.29
TCF3-216ENST00000592395 NKX6-2Q9C056 277 aaPredicted RBP13.26□□□□□ -0.29
TCF3-216ENST00000592395 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
TCF3-216ENST00000592395 TIMM8BQ9Y5J9 83 aaPredicted RBP13.26□□□□□ -0.29
TCF3-216ENST00000592395 TRAV8-1A0A0A6YYK1 113 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 A0A1B0GVG6 124 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 TCTAP57738 103 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
TCF3-216ENST00000592395 CYB561D1Q8N8Q1 229 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 ATG101Q9BSB4 218 aa13.25□□□□□ -0.29
TCF3-216ENST00000592395 DYNC2H1Q8NCM8 4307 aaKnown RBP13.25□□□□□ -0.29
TCF3-216ENST00000592395 IGLL5B9A064 214 aa13.24□□□□□ -0.29
TCF3-216ENST00000592395 ANXA2RQ3ZCQ2 193 aa13.24□□□□□ -0.29
TCF3-216ENST00000592395 ZFP69Q49AA0 526 aa13.24□□□□□ -0.29
TCF3-216ENST00000592395 Q6AWC8 147 aa13.24□□□□□ -0.29
TCF3-216ENST00000592395 ZNF680Q8NEM1 530 aa13.24□□□□□ -0.29
TCF3-216ENST00000592395 SFT2D1Q8WV19 159 aa13.24□□□□□ -0.29
TCF3-216ENST00000592395 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
TCF3-216ENST00000592395 CBY3A6NI87 242 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 SNURFLB1AK76 121 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 RGS13O14921 159 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 IFNA7P01567 189 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 RAB5CP51148 216 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 C9orf62Q8N4C0 152 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 NDFIP1Q9BT67 221 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 TREM1Q9NP99 234 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 NOP10Q9NPE3 64 aaKnown RBP13.23□□□□□ -0.29
TCF3-216ENST00000592395 ARL2-SNX15V9GYD0 113 aa13.23□□□□□ -0.29
TCF3-216ENST00000592395 IGHV1OR15-1A0A075B7D0 117 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 H2AFB1P0C5Y9 115 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 DEFB130BP0DP73 79 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 DEFB130AP0DP74 79 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 Q6ZQT7 251 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 TMEM75Q8N9X5 138 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 TVP23CQ96ET8 276 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 SGK494Q96LW2 274 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
TCF3-216ENST00000592395 IGHV4-4A0A075B6R2 117 aa13.21□□□□□ -0.29
TCF3-216ENST00000592395 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
TCF3-216ENST00000592395 FLI1Q01543 452 aaPredicted RBP13.21□□□□□ -0.29
TCF3-216ENST00000592395 C11orf72Q8NBR9 251 aa13.21□□□□□ -0.29
TCF3-216ENST00000592395 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
TCF3-216ENST00000592395 HIST1H2BAQ96A08 127 aa13.21□□□□□ -0.29
TCF3-216ENST00000592395 PLECQ15149 4684 aaKnown RBP13.2□□□□□ -0.3
TCF3-216ENST00000592395 F6UZH7 168 aa13.2□□□□□ -0.3
TCF3-216ENST00000592395 PEX7O00628 323 aa13.2□□□□□ -0.3
TCF3-216ENST00000592395 SULT1A2P50226 295 aa13.2□□□□□ -0.3
TCF3-216ENST00000592395 DAZ2Q13117 558 aaKnown RBP13.2□□□□□ -0.3
TCF3-216ENST00000592395 IBA57Q5T440 356 aaKnown RBP13.2□□□□□ -0.3
TCF3-216ENST00000592395 TCEAL7Q9BRU2 100 aa13.2□□□□□ -0.3
TCF3-216ENST00000592395 APLNQ9ULZ1 77 aa13.2□□□□□ -0.3
TCF3-216ENST00000592395 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 A0A1B0GV50 99 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 HTN3P15516 51 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 PPT1P50897 306 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 MUC21Q5SSG8 566 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 CST9LP1Q5W188 147 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 PRNTQ86SH4 94 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 LINC00612Q8N6U2 182 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 FAM210BQ96KR6 192 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
TCF3-216ENST00000592395 PAGE4O60829 102 aa13.18□□□□□ -0.3
TCF3-216ENST00000592395 TCL1AP56279 114 aa13.18□□□□□ -0.3
TCF3-216ENST00000592395 SAPCD1Q5SSQ6 148 aa13.18□□□□□ -0.3
TCF3-216ENST00000592395 FAM159AQ6UWV7 190 aa13.18□□□□□ -0.3
TCF3-216ENST00000592395 TP53TG3Q9ULZ0 132 aa13.18□□□□□ -0.3
TCF3-216ENST00000592395 SACSQ9NZJ4 4579 aa13.18□□□□□ -0.3
TCF3-216ENST00000592395 TRAV34A0A0B4J273 112 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 LY6G6CO95867 125 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 ATP5G1P05496 136 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 ATP5G3P48201 142 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 C8orf49Q96NF6 230 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 LYSTQ99698 3801 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 NDUFAF3Q9BU61 184 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 ALMS1Q8TCU4 4167 aa13.17□□□□□ -0.3
TCF3-216ENST00000592395 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms