RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CCDC28AQ8IWP9 274 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 CMTM2Q8TAZ6 248 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 TMEM37Q8WXS4 190 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 HIST1H2BAQ96A08 127 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 FAM210BQ96KR6 192 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 SLC50A1Q9BRV3 221 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 TREM1Q9NP99 234 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 GNG13Q9P2W3 67 aa6.8□□□□□ -1.32
BRCA1-226ENST00000591534 ZNF98A6NK75 572 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 H3BRN7 92 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 NBEAP1P0C6P0 100 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 PNRC1Q12796 327 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-226ENST00000591534 CST9LP1Q5W188 147 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 C16orf54Q6UWD8 224 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 UBE2DNLQ8IWF7 75 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 CSNK1G2-AS1Q8NCQ2 148 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 SMIM12Q96EX1 92 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 NRN1Q9NPD7 142 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
BRCA1-226ENST00000591534 BUB3O43684 328 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 ID1P41134 155 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 C12orf74Q32Q52 190 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 LGALS9BQ3B8N2 356 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 SPATA31B1PQ5VZV4 182 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 SIGLEC15Q6ZMC9 328 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 SVBPQ8N300 66 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 C5orf17Q8NAS9 161 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 NIPSNAP3BQ9BS92 247 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 SEC11CQ9BY50 192 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 DOK5Q9P104 306 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 XCL2Q9UBD3 114 aa6.78□□□□□ -1.32
BRCA1-226ENST00000591534 A0A087X0K7 114 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 B4DEV8 164 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 H3BMM0 161 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 TRIAP1O43715 76 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 SNAPINO95295 136 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 GATA2P23769 480 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-226ENST00000591534 RPL19P84098 196 aaKnown RBP6.77□□□□□ -1.33
BRCA1-226ENST00000591534 MIR17HGQ75NE6 70 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 MRPL53Q96EL3 112 aaKnown RBP6.77□□□□□ -1.33
BRCA1-226ENST00000591534 RFNGQ9Y644 331 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 AGRNO00468 2067 aa6.77□□□□□ -1.33
BRCA1-226ENST00000591534 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 F8W036 122 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
BRCA1-226ENST00000591534 USF2Q15853 346 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-226ENST00000591534 ZNF726P1Q15940 193 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 RNF212Q495C1 297 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 PATE2Q6UY27 113 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 BTF3L4Q96K17 158 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 SLC25A2Q9BXI2 301 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 CELA1Q9UNI1 258 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 GOLT1BQ9Y3E0 138 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 LY96Q9Y6Y9 160 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 PCLOQ9Y6V0 5065 aa6.76□□□□□ -1.33
BRCA1-226ENST00000591534 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 TRBV19A0A075B6N1 114 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 FAM74A7A6NL05 159 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 M0R2N4 97 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 ISLRO14498 428 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 PAGE4O60829 102 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 EMP1P54849 157 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 FGF8P55075 233 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-226ENST00000591534 TAS2R60P59551 318 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 GCSAMLQ5JQS6 135 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 EBLN2Q6P2I7 272 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 ZNF705AQ6ZN79 300 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-226ENST00000591534 FOXI2Q6ZQN5 318 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 FMC1Q96HJ9 113 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 FAM167A-AS1Q96KT0 104 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 LINC00052Q96N35 136 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 ATG101Q9BSB4 218 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 NDFIP1Q9BT67 221 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 DKK2Q9UBU2 259 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 VPS13DQ5THJ4 4388 aa6.75□□□□□ -1.33
BRCA1-226ENST00000591534 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 GAGE12BA1L429 117 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 GAGE12HA6NDE8 117 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 ZNF705FA8MVS1 300 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-226ENST00000591534 SLC25A5P05141 298 aaKnown RBP6.74□□□□□ -1.33
BRCA1-226ENST00000591534 SFTA3P0C7M3 94 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 ZNF705DP0CH99 300 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-226ENST00000591534 ZNF705BP0CI00 300 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-226ENST00000591534 IGLC2P0DOY2 106 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-226ENST00000591534 UBE2G1P62253 170 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 SAPCD1Q5SSQ6 148 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 C11orf52Q96A22 123 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 SCRT1Q9BWW7 348 aa6.74□□□□□ -1.33
BRCA1-226ENST00000591534 SAV1Q9H4B6 383 aaPredicted RBP6.74□□□□□ -1.33
BRCA1-226ENST00000591534 A0A1B0GV50 99 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 ZNF727A8MUV8 499 aa6.73□□□□□ -1.33
BRCA1-226ENST00000591534 C9JCJ5 164 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms