RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 TMED6Q8WW62 240 aa7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 GNPNAT1Q96EK6 184 aaPredicted RBP7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 HYLS1Q96M11 299 aa7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 VGLL1Q99990 258 aa7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 PSMG3Q9BT73 122 aaPredicted RBP7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 WFDC1Q9HC57 220 aa7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 RPH3ALQ9UNE2 315 aa7.45□□□□□ -1.22
CLPTM1-211ENST00000589347 IGLV2-18A0A075B6J9 118 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 TRGV1A0A0A0MS02 117 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 SERTM2A0A1B0GWG4 89 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 DIRC3C9JPN6 131 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 M0R2N4 97 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 TCL1AP56279 114 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 SERF2P84101 59 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 CD300CQ08708 224 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 ZFAND2AQ8N6M9 145 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 Q8TAT8 98 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 ZNF503Q96F45 646 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
CLPTM1-211ENST00000589347 TRGV11A0A075B6L2 103 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 TRAV26-1A0A087WT03 109 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 PGPA6NDG6 321 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 H3BNG1 76 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 K7EQM0 130 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 ZNF324O75467 553 aaPredicted RBP7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 ARL14EPLP0DKL9 152 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 TMPRSS5Q9H3S3 457 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 GSN-AS1Q9NRJ2 163 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 TMEM167BQ9NRX6 74 aa7.43□□□□□ -1.22
CLPTM1-211ENST00000589347 SPINK4O60575 86 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 STAG3L2P0CL84 134 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 STAG3L3P0CL85 134 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 ATP6V0CP27449 155 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 PRR9Q5T870 116 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 Q6AWC8 147 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 Q6ZTI0 123 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 GOLT1AQ6ZVE7 132 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 OR2T35Q8NGX2 323 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 ST6GAL2Q96JF0 529 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 C18orf15Q96N68 181 aa7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 ACTR3CQ9C0K3 210 aaPredicted RBP7.42□□□□□ -1.22
CLPTM1-211ENST00000589347 A0A0J9YY99 117 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 PRSS29PA6NIE9 313 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 HMGB3O15347 200 aaKnown RBP7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 CXorf1O96002 111 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 SLAQ13239 276 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 ZFP69Q49AA0 526 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 TTC32Q5I0X7 151 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 IQCF2Q8IXL9 164 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 C5orf17Q8NAS9 161 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 NAGKQ9UJ70 344 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 TNFSF18Q9UNG2 199 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 KLF12Q9Y4X4 402 aa7.41□□□□□ -1.22
CLPTM1-211ENST00000589347 TRAV21A0A0B4J279 112 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 EIF3GO75821 320 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 GCHFRP30047 84 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 MUC21Q5SSG8 566 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 Q6ZR54 194 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 RAB24Q969Q5 203 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 SPXQ9BT56 116 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 TREM1Q9NP99 234 aa7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 MRPL16Q9NX20 251 aaKnown RBP7.4□□□□□ -1.22
CLPTM1-211ENST00000589347 NBDYA0A0U1RRE5 68 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 CTXND1A0A1B0GTU2 59 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 RNF222A6NCQ9 220 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 FBLL1A6NHQ2 334 aaKnown RBP7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 TAAR5O14804 337 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 HOXA5P20719 270 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 TMEM183BQ1AE95 376 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 AKR1C8PQ5T2L2 129 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 SSX7Q7RTT5 188 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 TMEM183AQ8IXX5 376 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 KCNS1Q96KK3 526 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 SH3BGRL3Q9H299 93 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 SDF2L1Q9HCN8 221 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 TP53TG3Q9ULZ0 132 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 ICOSQ9Y6W8 199 aa7.39□□□□□ -1.23
CLPTM1-211ENST00000589347 F6UZH7 168 aa7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 RTL8CO15255 209 aa7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 PPT1P50897 306 aa7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 GNG5P63218 68 aa7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 RPL7L1Q6DKI1 246 aaKnown RBP7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 CYB561D1Q8N8Q1 229 aa7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 ZNRF2Q8NHG8 242 aa7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 PCNPQ8WW12 178 aaKnown RBP7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
CLPTM1-211ENST00000589347 TRAV8-1A0A0A6YYK1 113 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 TRGV4A0A0C4DH28 118 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 ARPC5O15511 151 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 PAX4O43316 350 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 IGHV3-53P01767 116 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 TCRAP04437 139 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 TDRG1Q3Y452 100 aa7.37□□□□□ -1.23
CLPTM1-211ENST00000589347 Q5BKY6 102 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms