RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SGK494Q96LW2 274 aa14.41□□□□□ -0.1
DDX39A-207ENST00000588542 PYGO2Q9BRQ0 406 aa14.41□□□□□ -0.1
DDX39A-207ENST00000588542 A0A1B0GV50 99 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 IGLV2-11P01706 119 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 H2AFB1P0C5Y9 115 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 SULT1A2P50226 295 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 ZNF493Q6ZR52 646 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 LINC00467Q9BRT7 94 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 ATG101Q9BSB4 218 aa14.4□□□□□ -0.1
DDX39A-207ENST00000588542 ALMS1Q8TCU4 4167 aa14.39□□□□□ -0.11
DDX39A-207ENST00000588542 TEX48A0A1B0GUV7 120 aa14.39□□□□□ -0.11
DDX39A-207ENST00000588542 RAB5CP51148 216 aa14.39□□□□□ -0.11
DDX39A-207ENST00000588542 CCDC28AQ8IWP9 274 aa14.39□□□□□ -0.11
DDX39A-207ENST00000588542 CYB561D1Q8N8Q1 229 aa14.39□□□□□ -0.11
DDX39A-207ENST00000588542 NKX6-2Q9C056 277 aaPredicted RBP14.39□□□□□ -0.11
DDX39A-207ENST00000588542 DNAH1Q9P2D7 4330 aa14.39□□□□□ -0.11
DDX39A-207ENST00000588542 C11orf94C9JXX5 98 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 IFNA7P01567 189 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 Q6AWC8 147 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 TMEM75Q8N9X5 138 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 LINC00479Q96M42 142 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 PSG8Q9UQ74 426 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 ARL2-SNX15V9GYD0 113 aa14.38□□□□□ -0.11
DDX39A-207ENST00000588542 LYRM9A8MSI8 78 aa14.37□□□□□ -0.11
DDX39A-207ENST00000588542 K7EQM0 130 aa14.37□□□□□ -0.11
DDX39A-207ENST00000588542 PAGE4O60829 102 aa14.37□□□□□ -0.11
DDX39A-207ENST00000588542 TREM1Q9NP99 234 aa14.37□□□□□ -0.11
DDX39A-207ENST00000588542 KLK5Q9Y337 293 aaPredicted RBP14.37□□□□□ -0.11
DDX39A-207ENST00000588542 TRAV10A0A0B4J240 114 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 TRAV1-1A0A0B4J248 108 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 PEX7O00628 323 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 ATP5G3P48201 142 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 CCL20P78556 96 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 FLI1Q01543 452 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-207ENST00000588542 ANXA2RQ3ZCQ2 193 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
DDX39A-207ENST00000588542 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
DDX39A-207ENST00000588542 TIMM8BQ9Y5J9 83 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-207ENST00000588542 IGHV1OR15-1A0A075B7D0 117 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 TRAV34A0A0B4J273 112 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 F6UZH7 168 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 CST9LP1Q5W188 147 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 C11orf72Q8NBR9 251 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 HIST1H2BAQ96A08 127 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 NOP10Q9NPE3 64 aaKnown RBP14.35□□□□□ -0.11
DDX39A-207ENST00000588542 TP53TG3Q9ULZ0 132 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 RYR3Q15413 4870 aa14.35□□□□□ -0.11
DDX39A-207ENST00000588542 RGS13O14921 159 aa14.34□□□□□ -0.11
DDX39A-207ENST00000588542 DAD1P61803 113 aa14.34□□□□□ -0.11
DDX39A-207ENST00000588542 PRNTQ86SH4 94 aa14.34□□□□□ -0.11
DDX39A-207ENST00000588542 C2CD4CQ8TF44 421 aa14.34□□□□□ -0.11
DDX39A-207ENST00000588542 C8orf49Q96NF6 230 aa14.34□□□□□ -0.11
DDX39A-207ENST00000588542 DEFB131BA0A096LNP1 70 aa14.33□□□□□ -0.12
DDX39A-207ENST00000588542 FBLL1A6NHQ2 334 aaKnown RBP14.33□□□□□ -0.12
DDX39A-207ENST00000588542 CBY3A6NI87 242 aa14.33□□□□□ -0.12
DDX39A-207ENST00000588542 NDFIP1Q9BT67 221 aa14.33□□□□□ -0.12
DDX39A-207ENST00000588542 PPT1P50897 306 aa14.32□□□□□ -0.12
DDX39A-207ENST00000588542 ZNF80P51504 273 aaPredicted RBP14.32□□□□□ -0.12
DDX39A-207ENST00000588542 MUC21Q5SSG8 566 aa14.32□□□□□ -0.12
DDX39A-207ENST00000588542 ZNF680Q8NEM1 530 aa14.32□□□□□ -0.12
DDX39A-207ENST00000588542 TCEAL7Q9BRU2 100 aa14.32□□□□□ -0.12
DDX39A-207ENST00000588542 GSN-AS1Q9NRJ2 163 aa14.32□□□□□ -0.12
DDX39A-207ENST00000588542 RYR2Q92736 4967 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 TRAV21A0A0B4J279 112 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 LCE6AA0A183 80 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 SNURFLB1AK76 121 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 DEFB130BP0DP73 79 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 DEFB130AP0DP74 79 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 DAZ2Q13117 558 aaKnown RBP14.31□□□□□ -0.12
DDX39A-207ENST00000588542 ALKAL2Q6UX46 152 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 LINC00612Q8N6U2 182 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 KLF12Q9Y4X4 402 aa14.31□□□□□ -0.12
DDX39A-207ENST00000588542 IGLL5B9A064 214 aa14.3□□□□□ -0.12
DDX39A-207ENST00000588542 SAPCD1Q5SSQ6 148 aa14.3□□□□□ -0.12
DDX39A-207ENST00000588542 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
DDX39A-207ENST00000588542 Q86TA4 180 aa14.3□□□□□ -0.12
DDX39A-207ENST00000588542 MANBALQ9NQG1 85 aa14.3□□□□□ -0.12
DDX39A-207ENST00000588542 GNG13Q9P2W3 67 aa14.3□□□□□ -0.12
DDX39A-207ENST00000588542 GCGP01275 180 aa14.29□□□□□ -0.12
DDX39A-207ENST00000588542 TCL1AP56279 114 aa14.29□□□□□ -0.12
DDX39A-207ENST00000588542 TDRG1Q3Y452 100 aa14.29□□□□□ -0.12
DDX39A-207ENST00000588542 SMUG1Q53HV7 270 aa14.29□□□□□ -0.12
DDX39A-207ENST00000588542 C11orf21Q9P2W6 132 aa14.29□□□□□ -0.12
DDX39A-207ENST00000588542 HYDINQ4G0P3 5121 aa14.29□□□□□ -0.12
DDX39A-207ENST00000588542 TRBV6-1A0A0K0K1D8 114 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 SCO2A0A1W2PP80 73 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 TEX46H3BTG2 121 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 FAM159AQ6UWV7 190 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 FMC1Q96HJ9 113 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 APLNQ9ULZ1 77 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 VPS13DQ5THJ4 4388 aa14.28□□□□□ -0.12
DDX39A-207ENST00000588542 IGHV4-4A0A075B6R2 117 aa14.27□□□□□ -0.13
DDX39A-207ENST00000588542 HTN3P15516 51 aa14.27□□□□□ -0.13
DDX39A-207ENST00000588542 TMEM183BQ1AE95 376 aa14.27□□□□□ -0.13
DDX39A-207ENST00000588542 Q6ZTI0 123 aa14.27□□□□□ -0.13
DDX39A-207ENST00000588542 MDFICQ9P1T7 246 aa14.27□□□□□ -0.13
DDX39A-207ENST00000588542 NAGKQ9UJ70 344 aa14.27□□□□□ -0.13
DDX39A-207ENST00000588542 GAGE12BA1L429 117 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 GNRH2O43555 120 aa14.26□□□□□ -0.13
DDX39A-207ENST00000588542 SPINK4O60575 86 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms