RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 OR11H2Q8NH07 326 aa12.7□□□□□ -0.38
RANBP3-209ENST00000587411 IGHV4-4A0A075B6R2 117 aa12.69□□□□□ -0.38
RANBP3-209ENST00000587411 MYMXA0A1B0GTQ4 84 aa12.69□□□□□ -0.38
RANBP3-209ENST00000587411 NDPQ00604 133 aa12.69□□□□□ -0.38
RANBP3-209ENST00000587411 AMTNQ6UX39 209 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 MRAP2Q96G30 205 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 ODF3BA8MYP8 253 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 TCTEX1D4Q5JR98 221 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
RANBP3-209ENST00000587411 ZGRF1Q86YA3 2104 aa12.67□□□□□ -0.38
RANBP3-209ENST00000587411 CD3EP07766 207 aa12.67□□□□□ -0.38
RANBP3-209ENST00000587411 SLC25A16P16260 332 aa12.67□□□□□ -0.38
RANBP3-209ENST00000587411 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
RANBP3-209ENST00000587411 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
RANBP3-209ENST00000587411 HIF1ANQ9NWT6 349 aa12.67□□□□□ -0.38
RANBP3-209ENST00000587411 M0R1W7 72 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 HOXA3O43365 443 aaPredicted RBP12.66□□□□□ -0.38
RANBP3-209ENST00000587411 BUB3O43684 328 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 EFNA4P52798 201 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 ORMDL2Q53FV1 153 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 TMEM78Q5T7P6 136 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 ATP6V0E2Q8NHE4 81 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 TRAV26-2A0A0B4J265 109 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 SPANXN1Q5VSR9 72 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 RNF182Q8N6D2 247 aa12.66□□□□□ -0.38
RANBP3-209ENST00000587411 SH3BGRL2Q9UJC5 107 aa12.65□□□□□ -0.38
RANBP3-209ENST00000587411 Q8N6K4 173 aa12.65□□□□□ -0.38
RANBP3-209ENST00000587411 ZFAND3Q9H8U3 227 aa12.65□□□□□ -0.38
RANBP3-209ENST00000587411 APOMO95445 188 aa12.65□□□□□ -0.39
RANBP3-209ENST00000587411 PRTN3P24158 256 aa12.65□□□□□ -0.39
RANBP3-209ENST00000587411 MORN3Q6PF18 240 aaPredicted RBP12.65□□□□□ -0.39
RANBP3-209ENST00000587411 ZFHX4Q86UP3 3567 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 IGHV3OR16-8A0A075B7F1 116 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 OOSP1A8MZH6 123 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 ROS1P08922 2347 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 KLRD1Q13241 179 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 TOMM6Q96B49 74 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 SCGB3A1Q96QR1 104 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.64□□□□□ -0.39
RANBP3-209ENST00000587411 C1QTNF4Q9BXJ3 329 aa12.64□□□□□ -0.39
RANBP3-209ENST00000587411 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
RANBP3-209ENST00000587411 EBI3Q14213 229 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 NEXN-AS1Q8NBZ9 246 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 DLX4Q92988 240 aaPredicted RBP12.63□□□□□ -0.39
RANBP3-209ENST00000587411 RAXQ9Y2V3 346 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 CKS1BP61024 79 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 CFAP161Q6P656 301 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 C9orf47Q6ZRZ4 202 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 C20orf78Q9BR46 151 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 PGPEP1Q9NXJ5 209 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
RANBP3-209ENST00000587411 IGHV3-35A0A0C4DH35 117 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 INSL3P51460 131 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 FOXI1Q12951 378 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 MTURNQ8N3F0 131 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 PKDREJQ9NTG1 2253 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 SCGB2A2Q13296 93 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 CFAP126Q5VTH2 177 aa12.62□□□□□ -0.39
RANBP3-209ENST00000587411 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
RANBP3-209ENST00000587411 MRPL16Q9NX20 251 aaKnown RBP12.62□□□□□ -0.39
RANBP3-209ENST00000587411 IGHV7-81A0A0B4J1V7 117 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 KLK9Q2XQG4 91 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 KLK9Q9UKQ9 250 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 CUL9Q8IWT3 2517 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 CACNA1HO95180 2353 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 TRAV8-2A0A0B4J237 113 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
RANBP3-209ENST00000587411 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
RANBP3-209ENST00000587411 ATP5G2Q06055 141 aa12.6□□□□□ -0.39
RANBP3-209ENST00000587411 LYRM7Q5U5X0 104 aa12.6□□□□□ -0.39
RANBP3-209ENST00000587411 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
RANBP3-209ENST00000587411 TIMD4Q96H15 378 aa12.6□□□□□ -0.39
RANBP3-209ENST00000587411 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
RANBP3-209ENST00000587411 CLPSL1A2RUU4 121 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 H3BVH4 76 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 CLEC3BP05452 202 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 MINOS1Q5TGZ0 78 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 LCNL1Q6ZST4 164 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 MINOS1-NBL1R4GNA1 71 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 UBE2D1P51668 147 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 MSRB2Q9Y3D2 182 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
RANBP3-209ENST00000587411 CENPVL3A0A0U1RRI6 287 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 ZNF815PA8K554 130 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 C8orf86Q6ZUL3 223 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 EP300Q09472 2414 aaPredicted RBP12.58□□□□□ -0.4
RANBP3-209ENST00000587411 RP1L1Q8IWN7 2480 aaPredicted RBP12.58□□□□□ -0.4
RANBP3-209ENST00000587411 C1orf122Q6ZSJ8 110 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 BAALCQ8WXS3 180 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 CLUHP3Q96NS8 147 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 METTL26Q96S19 204 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 KLK15Q9H2R5 256 aa12.58□□□□□ -0.4
RANBP3-209ENST00000587411 IGHV3-66A0A0C4DH42 116 aa12.57□□□□□ -0.4
RANBP3-209ENST00000587411 SYT8Q8NBV8 401 aa12.57□□□□□ -0.4
RANBP3-209ENST00000587411 RASL10AQ92737 203 aa12.57□□□□□ -0.4
RANBP3-209ENST00000587411 ZZEF1O43149 2961 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms