RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 Q6ZR54 194 aa12.36□□□□□ -0.43
TPM4-206ENST00000587201 ASB13Q8WXK3 278 aa12.36□□□□□ -0.43
TPM4-206ENST00000587201 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
TPM4-206ENST00000587201 PRSS29PA6NIE9 313 aa12.35□□□□□ -0.43
TPM4-206ENST00000587201 RTL8CO15255 209 aa12.35□□□□□ -0.43
TPM4-206ENST00000587201 ATP6V0CP27449 155 aa12.35□□□□□ -0.43
TPM4-206ENST00000587201 TCL1AP56279 114 aa12.35□□□□□ -0.43
TPM4-206ENST00000587201 INO80EQ8NBZ0 244 aaPredicted RBP12.35□□□□□ -0.43
TPM4-206ENST00000587201 OR2G3Q8NGZ4 309 aa12.35□□□□□ -0.43
TPM4-206ENST00000587201 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
TPM4-206ENST00000587201 SPINK4O60575 86 aa12.34□□□□□ -0.43
TPM4-206ENST00000587201 LINC00588Q9Y4M8 146 aa12.34□□□□□ -0.43
TPM4-206ENST00000587201 LENEPQ9Y5L5 61 aa12.34□□□□□ -0.43
TPM4-206ENST00000587201 FXYD6-FXYD2A0A087WZ82 144 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 MBP02144 154 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 STAG3L2P0CL84 134 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 STAG3L3P0CL85 134 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 ARL14EPLP0DKL9 152 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 RGS21Q2M5E4 152 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 SOHLH1Q5JUK2 328 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 GOLT1AQ6ZVE7 132 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
TPM4-206ENST00000587201 FAT2Q9NYQ8 4349 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 SERF2P84101 59 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 Q6AWC8 147 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 ARL6IP6Q8N6S5 226 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 RAB24Q969Q5 203 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 MRPL16Q9NX20 251 aaKnown RBP12.32□□□□□ -0.44
TPM4-206ENST00000587201 DNAH17Q9UFH2 4485 aa12.32□□□□□ -0.44
TPM4-206ENST00000587201 H3BNG1 76 aa12.31□□□□□ -0.44
TPM4-206ENST00000587201 GNG5P63218 68 aa12.31□□□□□ -0.44
TPM4-206ENST00000587201 C1orf134Q5TEV5 83 aa12.31□□□□□ -0.44
TPM4-206ENST00000587201 OR2T35Q8NGX2 323 aa12.31□□□□□ -0.44
TPM4-206ENST00000587201 SH3BGRL3Q9H299 93 aa12.31□□□□□ -0.44
TPM4-206ENST00000587201 TNFSF18Q9UNG2 199 aa12.31□□□□□ -0.44
TPM4-206ENST00000587201 BORCS7-ASMTA0A0B4J1R7 106 aa12.3□□□□□ -0.44
TPM4-206ENST00000587201 RNF222A6NCQ9 220 aa12.3□□□□□ -0.44
TPM4-206ENST00000587201 RPL7L1Q6DKI1 246 aaKnown RBP12.3□□□□□ -0.44
TPM4-206ENST00000587201 FAM159AQ6UWV7 190 aa12.3□□□□□ -0.44
TPM4-206ENST00000587201 ST6GAL2Q96JF0 529 aa12.3□□□□□ -0.44
TPM4-206ENST00000587201 TRAV8-1A0A0A6YYK1 113 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 NBDYA0A0U1RRE5 68 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 A0A1B0GVY2 172 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 IGHV3-53P01767 116 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 GCHFRP30047 84 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 VSIG2Q96IQ7 327 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 ACTR3CQ9C0K3 210 aaPredicted RBP12.29□□□□□ -0.44
TPM4-206ENST00000587201 MDFICQ9P1T7 246 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 NAGKQ9UJ70 344 aa12.29□□□□□ -0.44
TPM4-206ENST00000587201 TRGV11A0A075B6L2 103 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 F6UZH7 168 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 CXorf1O96002 111 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 TMEM183BQ1AE95 376 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 TMEM183AQ8IXX5 376 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 TREM1Q9NP99 234 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
TPM4-206ENST00000587201 TRAV21A0A0B4J279 112 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 SERTM2A0A1B0GWG4 89 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 ESRGQ1W209 222 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 C5orf17Q8NAS9 161 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 TVP23CQ96ET8 276 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 SGK494Q96LW2 274 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 Q9H8V8 135 aa12.27□□□□□ -0.45
TPM4-206ENST00000587201 A0A096LPF7 62 aa12.26□□□□□ -0.45
TPM4-206ENST00000587201 PAX4O43316 350 aa12.26□□□□□ -0.45
TPM4-206ENST00000587201 SUMO1P63165 101 aaKnown RBP12.26□□□□□ -0.45
TPM4-206ENST00000587201 IQCF2Q8IXL9 164 aa12.26□□□□□ -0.45
TPM4-206ENST00000587201 SPXQ9BT56 116 aa12.26□□□□□ -0.45
TPM4-206ENST00000587201 NDFIP1Q9BT67 221 aa12.26□□□□□ -0.45
TPM4-206ENST00000587201 K7EQM0 130 aa12.25□□□□□ -0.45
TPM4-206ENST00000587201 TCRAP04437 139 aa12.25□□□□□ -0.45
TPM4-206ENST00000587201 SLAQ13239 276 aa12.25□□□□□ -0.45
TPM4-206ENST00000587201 TDRG1Q3Y452 100 aa12.25□□□□□ -0.45
TPM4-206ENST00000587201 C6orf223Q8N319 242 aa12.25□□□□□ -0.45
TPM4-206ENST00000587201 PRO0255Q9UI72 69 aa12.25□□□□□ -0.45
TPM4-206ENST00000587201 G3V3Q6 166 aa12.24□□□□□ -0.45
TPM4-206ENST00000587201 ARPC5O15511 151 aa12.24□□□□□ -0.45
TPM4-206ENST00000587201 GNRH2O43555 120 aa12.24□□□□□ -0.45
TPM4-206ENST00000587201 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
TPM4-206ENST00000587201 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
TPM4-206ENST00000587201 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
TPM4-206ENST00000587201 MUC4Q99102 2169 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 TRGV4A0A0C4DH28 118 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 TAAR5O14804 337 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 FHL2Q14192 279 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 RASL10AQ92737 203 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 C8orf49Q96NF6 230 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 SDF2L1Q9HCN8 221 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 EPDR1Q9UM22 224 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 PSG8Q9UQ74 426 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 HHLA3Q9XRX5 114 aa12.23□□□□□ -0.45
TPM4-206ENST00000587201 TYMSP04818 313 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms