RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SAPCD1Q5SSQ6 148 aa13.83□□□□□ -0.2
DDX39A-204ENST00000586558 FMC1Q96HJ9 113 aa13.83□□□□□ -0.2
DDX39A-204ENST00000586558 TREM1Q9NP99 234 aa13.83□□□□□ -0.2
DDX39A-204ENST00000586558 MEF2BQ02080 365 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-204ENST00000586558 PRR9Q5T870 116 aa13.82□□□□□ -0.2
DDX39A-204ENST00000586558 PYGO2Q9BRQ0 406 aa13.82□□□□□ -0.2
DDX39A-204ENST00000586558 TRBV6-1A0A0K0K1D8 114 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 LOC102723971A0A1B0GUV8 181 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 ZNF324O75467 553 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-204ENST00000586558 S100A9P06702 114 aaKnown RBP13.81□□□□□ -0.2
DDX39A-204ENST00000586558 AKR1C3P42330 323 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 UBE2G1P62253 170 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 Q6AWC8 147 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 PRNTQ86SH4 94 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 Q86TA4 180 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 TVP23CQ96ET8 276 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 SGK494Q96LW2 274 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 LINC00479Q96M42 142 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 LINC00467Q9BRT7 94 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
DDX39A-204ENST00000586558 TRAV34A0A0B4J273 112 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 SCO2A0A1W2PP80 73 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 ZNF705GA8MUZ8 300 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-204ENST00000586558 PDE6DO43924 150 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 ZNF493Q6ZR52 646 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 IL17DQ8TAD2 202 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 C2CD4CQ8TF44 421 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 C11orf52Q96A22 123 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 ZFP30Q9Y2G7 519 aa13.8□□□□□ -0.2
DDX39A-204ENST00000586558 DEFB4AO15263 64 aa13.79□□□□□ -0.2
DDX39A-204ENST00000586558 TMEM183BQ1AE95 376 aa13.79□□□□□ -0.2
DDX39A-204ENST00000586558 TEX48A0A1B0GUV7 120 aa13.78□□□□□ -0.2
DDX39A-204ENST00000586558 SMUG1Q53HV7 270 aa13.78□□□□□ -0.2
DDX39A-204ENST00000586558 TMEM263Q8WUH6 116 aaKnown RBP13.78□□□□□ -0.2
DDX39A-204ENST00000586558 C16orf74Q96GX8 76 aa13.78□□□□□ -0.2
DDX39A-204ENST00000586558 TRAV21A0A0B4J279 112 aa13.77□□□□□ -0.21
DDX39A-204ENST00000586558 RGS13O14921 159 aa13.77□□□□□ -0.21
DDX39A-204ENST00000586558 HTN1P15515 57 aa13.77□□□□□ -0.21
DDX39A-204ENST00000586558 RBFOX3A6NFN3 312 aa13.76□□□□□ -0.21
DDX39A-204ENST00000586558 LTAP01374 205 aa13.76□□□□□ -0.21
DDX39A-204ENST00000586558 ANXA2RQ3ZCQ2 193 aa13.76□□□□□ -0.21
DDX39A-204ENST00000586558 COX8CQ7Z4L0 72 aa13.76□□□□□ -0.21
DDX39A-204ENST00000586558 EIF4E3Q8N5X7 224 aaKnown RBP13.76□□□□□ -0.21
DDX39A-204ENST00000586558 MUC7Q8TAX7 377 aa13.76□□□□□ -0.21
DDX39A-204ENST00000586558 RNASE8Q8TDE3 154 aaKnown RBP13.76□□□□□ -0.21
DDX39A-204ENST00000586558 C8orf49Q96NF6 230 aa13.76□□□□□ -0.21
DDX39A-204ENST00000586558 IGHV1OR15-1A0A075B7D0 117 aa13.75□□□□□ -0.21
DDX39A-204ENST00000586558 GCGP01275 180 aa13.75□□□□□ -0.21
DDX39A-204ENST00000586558 AZU1P20160 251 aa13.75□□□□□ -0.21
DDX39A-204ENST00000586558 EMP1P54849 157 aa13.75□□□□□ -0.21
DDX39A-204ENST00000586558 ZNF506Q5JVG8 444 aa13.75□□□□□ -0.21
DDX39A-204ENST00000586558 C11orf45Q8TAV5 145 aa13.75□□□□□ -0.21
DDX39A-204ENST00000586558 PFN1P07737 140 aaKnown RBP13.74□□□□□ -0.21
DDX39A-204ENST00000586558 SPART-AS1P0CW21 52 aa13.74□□□□□ -0.21
DDX39A-204ENST00000586558 RPL35P42766 123 aaKnown RBP13.74□□□□□ -0.21
DDX39A-204ENST00000586558 TDRG1Q3Y452 100 aa13.74□□□□□ -0.21
DDX39A-204ENST00000586558 FAM159AQ6UWV7 190 aa13.74□□□□□ -0.21
DDX39A-204ENST00000586558 PLAC8L1A1L4L8 177 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 CXorf65A6NEN9 183 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 CBY3A6NI87 242 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 LYRM9A8MSI8 78 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 NDUFS6O75380 124 aaKnown RBP13.73□□□□□ -0.21
DDX39A-204ENST00000586558 PRM2P04554 102 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 Q6ZQT7 251 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 TMEM183AQ8IXX5 376 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 FAM210AQ96ND0 272 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 DKK2Q9UBU2 259 aa13.73□□□□□ -0.21
DDX39A-204ENST00000586558 TMEM250H0YL14 139 aa13.72□□□□□ -0.21
DDX39A-204ENST00000586558 ZNF80P51504 273 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-204ENST00000586558 TOR2AQ5JU69 321 aa13.72□□□□□ -0.21
DDX39A-204ENST00000586558 IBA57Q5T440 356 aaKnown RBP13.72□□□□□ -0.21
DDX39A-204ENST00000586558 ZNF767PQ75MW2 155 aa13.72□□□□□ -0.21
DDX39A-204ENST00000586558 BAGE2Q86Y30 109 aa13.72□□□□□ -0.21
DDX39A-204ENST00000586558 KCNS1Q96KK3 526 aa13.72□□□□□ -0.21
DDX39A-204ENST00000586558 MED9Q9NWA0 146 aa13.72□□□□□ -0.21
DDX39A-204ENST00000586558 TIMM8BQ9Y5J9 83 aaPredicted RBP13.72□□□□□ -0.21
DDX39A-204ENST00000586558 FABP5P3A8MUU1 101 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 SNURFLB1AK76 121 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 C3orf84H3BNL1 204 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 RAB14P61106 215 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 MUC21Q5SSG8 566 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 FAM222AQ5U5X8 452 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 ZC2HC1AQ96GY0 325 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 EIF5A2Q9GZV4 153 aaKnown RBP13.71□□□□□ -0.21
DDX39A-204ENST00000586558 CELA1Q9UNI1 258 aa13.71□□□□□ -0.21
DDX39A-204ENST00000586558 TRGV11A0A075B6L2 103 aa13.7□□□□□ -0.22
DDX39A-204ENST00000586558 FAM162BQ5T6X4 162 aa13.7□□□□□ -0.22
DDX39A-204ENST00000586558 PCNPQ8WW12 178 aaKnown RBP13.7□□□□□ -0.22
DDX39A-204ENST00000586558 SMIM12Q96EX1 92 aa13.7□□□□□ -0.22
DDX39A-204ENST00000586558 MLST8Q9BVC4 326 aa13.7□□□□□ -0.22
DDX39A-204ENST00000586558 NAGKQ9UJ70 344 aa13.7□□□□□ -0.22
DDX39A-204ENST00000586558 NANOS2P60321 138 aaKnown RBP13.69□□□□□ -0.22
DDX39A-204ENST00000586558 DAZ2Q13117 558 aaKnown RBP13.69□□□□□ -0.22
DDX39A-204ENST00000586558 C11orf72Q8NBR9 251 aa13.69□□□□□ -0.22
DDX39A-204ENST00000586558 SDF2L1Q9HCN8 221 aa13.69□□□□□ -0.22
DDX39A-204ENST00000586558 GNG4P50150 75 aa13.68□□□□□ -0.22
DDX39A-204ENST00000586558 TCL1AP56279 114 aa13.68□□□□□ -0.22
DDX39A-204ENST00000586558 ZNF415Q09FC8 603 aa13.68□□□□□ -0.22
DDX39A-204ENST00000586558 CENPWQ5EE01 88 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms