RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 C19orf84I3L1E1 186 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 PPYP01298 95 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 IGLV2-8P01709 118 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 IGHV4-38-2P0DP08 117 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 FCER1GP30273 86 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 RPL27AP46776 148 aaKnown RBP1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 HMGA2P52926 109 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 CRIP2P52943 208 aaPredicted RBP1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 NANOS3P60323 173 aaKnown RBP1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 DYNLT1P63172 113 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 SERF2P84101 59 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 Q0VFX4 171 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 PLGLAQ15195 96 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 KISS1Q15726 138 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 LPAL2Q16609 132 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 ASB16-AS1Q495Z4 193 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 ADAMTSL4-AS1Q5T5F5 129 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 Q6JHZ5 121 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 FAM72DQ6L9T8 149 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 C18orf65Q6ZTR6 163 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 ORMDL3Q8N138 153 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 ZNF524Q96C55 264 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 TMEM141Q96I45 108 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 Q96M85 177 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 SCGB3A1Q96QR1 104 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 CCL28Q9NRJ3 127 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 PRO1854Q9UHT4 67 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 NDUFA12Q9UI09 145 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 PHLDA3Q9Y5J5 127 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 ALPK3Q96L96 1907 aa1.27□□□□□ -2.21
NEDD4L-212ENST00000585594 COL11A2P13942 1736 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ALS2Q96Q42 1657 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ROBO1Q9Y6N7 1651 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 TRBV7-3A0A075B6L6 115 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 A0A087X002 238 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 IGHV7-81A0A0B4J1V7 117 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 IGHV3-72A0A0B4J1Y9 119 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 IGKV6-21A0A0C4DH24 114 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 A0A1B0GVT2 93 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 TMEM223A0PJW6 202 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 FAM223BA6NKX1 122 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 C11orf94C9JXX5 98 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 F8WEM9 126 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 C16orf97H3BN30 126 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 IGHV3-48P01763 117 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 IGHV4-39P01824 125 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 BGLAPP02818 100 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 CHTF8P0CG12 524 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 PRB4P10163 310 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ZNF22P17026 224 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 COX7A1P24310 79 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 SPINT3P49223 89 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 UBE2D1P51668 147 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 FXYD7P58549 80 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 FXYD6P3P58550 94 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 SYCNQ0VAF6 134 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 CCL14Q16627 93 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 CRIP3Q6Q6R5 217 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 SFTA2Q6UW10 78 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 REG3GQ6UW15 175 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ZNF497Q6ZNH5 498 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ZNF818PQ6ZRF7 136 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 C1orf229Q6ZS94 237 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 VMO1Q7Z5L0 202 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 C17orf82Q86X59 251 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 PRSS3P2Q8NHM4 247 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 CCL4L1Q8NHW4 92 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 TMEM190Q8WZ59 177 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ZNF414Q96IQ9 312 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 RETNLBQ9BQ08 111 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 TTTY13Q9BZ97 58 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 BPESC1Q9GZL8 116 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 CYP4F30PQ9H0H9 118 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 C7orf69Q9H7B7 122 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 TIMM9Q9Y5J7 89 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 PHF3Q92576 2039 aaKnown RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 DOCK6Q96HP0 2047 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 DOCK2Q92608 1830 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 SIPA1L3O60292 1781 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 ANKRD36CQ5JPF3 1778 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 UBR2Q8IWV8 1755 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 COL5A3P25940 1745 aaPredicted RBP1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 PKD1L3Q7Z443 1732 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 FMN2Q9NZ56 1722 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 PIK3C2AO00443 1686 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 MYOM1P52179 1685 aa1.26□□□□□ -2.21
NEDD4L-212ENST00000585594 SLIT2O94813 1529 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 DOCK8Q8NF50 2099 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 COL3A1P02461 1466 aaPredicted RBP1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 FANCMQ8IYD8 2048 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 DOCK4Q8N1I0 1966 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 GREB1LQ9C091 1923 aaPredicted RBP1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 BRCA1P38398 1863 aaKnown RBP1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 PLXNA4Q9HCM2 1894 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 ARID2Q68CP9 1835 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 IGLV3-12A0A075B6K2 115 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 IGLV3-9A0A075B6K5 115 aa1.25□□□□□ -2.21
NEDD4L-212ENST00000585594 IGLV3-32A0A0A0MS00 114 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms