RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ARL14EPLP0DKL9 152 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 C10orf113Q5VZT2 155 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 OR51G1Q8NGK1 321 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 PGPEP1Q9NXJ5 209 aa12.51□□□□□ -0.41
TOP3A-220ENST00000585031 A8MTW9 85 aa12.5□□□□□ -0.41
TOP3A-220ENST00000585031 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-220ENST00000585031 SMR3BP02814 79 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-220ENST00000585031 PSG1P11464 419 aa12.5□□□□□ -0.41
TOP3A-220ENST00000585031 GATA2P23769 480 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-220ENST00000585031 PQLC2Q6ZP29 291 aa12.5□□□□□ -0.41
TOP3A-220ENST00000585031 Q6ZRN7 208 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-220ENST00000585031 S100A7AQ86SG5 101 aa12.5□□□□□ -0.41
TOP3A-220ENST00000585031 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
TOP3A-220ENST00000585031 TOMM40O96008 361 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 RD3LP0DJH9 198 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 GCHFRP30047 84 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 PLP1P60201 277 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 KRTAP10-1P60331 282 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
TOP3A-220ENST00000585031 ZNF90Q03938 601 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 SUN5Q8TC36 379 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 IGF2BP2-AS1Q96M15 143 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 TMPRSS5Q9H3S3 457 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 ARL2-SNX15V9GYD0 113 aa12.49□□□□□ -0.41
TOP3A-220ENST00000585031 J3QL48 77 aa12.48□□□□□ -0.41
TOP3A-220ENST00000585031 HYPMO75409 117 aa12.48□□□□□ -0.41
TOP3A-220ENST00000585031 EIF3GO75821 320 aaKnown RBP eCLIP12.48□□□□□ -0.41
TOP3A-220ENST00000585031 SPATA31B1PQ5VZV4 182 aa12.48□□□□□ -0.41
TOP3A-220ENST00000585031 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
TOP3A-220ENST00000585031 ZNF586Q9NXT0 402 aa12.48□□□□□ -0.41
TOP3A-220ENST00000585031 LRP1Q07954 4544 aaKnown RBP12.48□□□□□ -0.41
TOP3A-220ENST00000585031 TMEM250H0YL14 139 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 OR7C2O60412 319 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 PAGE4O60829 102 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 ATP5G1P05496 136 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 ID1P41134 155 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 ATP5G3P48201 142 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 CEBPGP53567 150 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 ESRGQ1W209 222 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 TTC32Q5I0X7 151 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 OR1B1Q8NGR6 318 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 TMEM208Q9BTX3 173 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
TOP3A-220ENST00000585031 DOK5Q9P104 306 aa12.47□□□□□ -0.41
TOP3A-220ENST00000585031 CBY3A6NI87 242 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 F6UZH7 168 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 M0R2Z0 102 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 PDE6DO43924 150 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 ORM2P19652 201 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 S100A7P31151 101 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 CYB561D1Q8N8Q1 229 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 TMEM37Q8WXS4 190 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 RNF125Q96EQ8 232 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 HIGD1AQ9Y241 93 aa12.46□□□□□ -0.41
TOP3A-220ENST00000585031 LINC00315P59091 139 aa12.45□□□□□ -0.42
TOP3A-220ENST00000585031 LYZP61626 148 aa12.45□□□□□ -0.42
TOP3A-220ENST00000585031 SPINK13Q1W4C9 94 aa12.45□□□□□ -0.42
TOP3A-220ENST00000585031 FAM74A3Q4VXF1 159 aa12.45□□□□□ -0.42
TOP3A-220ENST00000585031 CST9LP1Q5W188 147 aa12.45□□□□□ -0.42
TOP3A-220ENST00000585031 EBLN2Q6P2I7 272 aa12.45□□□□□ -0.42
TOP3A-220ENST00000585031 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 TSPOP30536 169 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 UBE2G2P60604 165 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 HAMPP81172 84 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 PATE2Q6UY27 113 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 CLRN3Q8NCR9 226 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 UPK3BQ9BT76 320 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 RNF24Q9Y225 148 aa12.44□□□□□ -0.42
TOP3A-220ENST00000585031 ISLRO14498 428 aa12.43□□□□□ -0.42
TOP3A-220ENST00000585031 SCO1O75880 301 aa12.43□□□□□ -0.42
TOP3A-220ENST00000585031 UBE2L3P68036 154 aaKnown RBP12.43□□□□□ -0.42
TOP3A-220ENST00000585031 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
TOP3A-220ENST00000585031 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
TOP3A-220ENST00000585031 SLC25A2Q9BXI2 301 aa12.43□□□□□ -0.42
TOP3A-220ENST00000585031 TNFRSF18Q9Y5U5 241 aa12.43□□□□□ -0.42
TOP3A-220ENST00000585031 M0R036 132 aa12.42□□□□□ -0.42
TOP3A-220ENST00000585031 TVP23CQ96ET8 276 aa12.42□□□□□ -0.42
TOP3A-220ENST00000585031 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
TOP3A-220ENST00000585031 OR51M1Q9H341 326 aa12.42□□□□□ -0.42
TOP3A-220ENST00000585031 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 TRAV26-1A0A087WT03 109 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 A0A0J9YY99 117 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 FAM74A7A6NL05 159 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 H3BQ15 152 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 FAM229AH3BQW9 127 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
TOP3A-220ENST00000585031 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-220ENST00000585031 RHEBQ15382 184 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 IGFL4Q6B9Z1 124 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 ZNF503Q96F45 646 aa12.41□□□□□ -0.42
TOP3A-220ENST00000585031 A0A1W2PRE2 83 aa12.4□□□□□ -0.42
TOP3A-220ENST00000585031 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
TOP3A-220ENST00000585031 HOXA5P20719 270 aa12.4□□□□□ -0.42
TOP3A-220ENST00000585031 SERTAD4-AS1Q5TG53 156 aa12.4□□□□□ -0.42
TOP3A-220ENST00000585031 ATRAIDQ6UW56 229 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms