RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ZNF415Q09FC8 603 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 OPCMLQ14982 345 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 PYDC2Q56P42 97 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 PAPPA-AS1Q5QFB9 102 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 TMEM14EPQ6UXP3 125 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 S100A7AQ86SG5 101 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 ZNF546Q86UE3 836 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 BPIFA4PQ86YQ2 179 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 ZNF431Q8TF32 576 aaPredicted RBP5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 NPVFQ9HCQ7 196 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 V9GYH0 126 aa5.32□□□□□ -1.56
SMCHD1-210ENST00000583800 TRGV1A0A0A0MS02 117 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 C9orf170A2RU37 121 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 FNDC10F2Z333 226 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 H3BQ15 152 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 GOSR2O14653 212 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 AGPAT2O15120 278 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 COX7A2P2O60397 106 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 NXPH4O95158 308 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 IGLC2P0DOY2 106 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 LEPP41159 167 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 TMBIM6P55061 237 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 KRTAP10-1P60331 282 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 ARL16Q0P5N6 197 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 DAZ2Q13117 558 aaKnown RBP5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 PXDC1Q5TGL8 231 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 C11orf72Q8NBR9 251 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 OR10P1Q8NGE3 313 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 TMEM37Q8WXS4 190 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 SMIM8Q96KF7 97 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 MGST2Q99735 147 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 PYGO2Q9BRQ0 406 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 PTTG2Q9NZH5 202 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 RNF24Q9Y225 148 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 PXMP4Q9Y6I8 212 aa5.31□□□□□ -1.56
SMCHD1-210ENST00000583800 TRAV5A0A0B4J249 113 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 C7orf71A4D174 169 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 H3BMQ9 156 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 IGHV3-53P01767 116 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 UBE2MP61081 183 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 HAMPP81172 84 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 ERCC8Q13216 396 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 BTN1A1Q13410 526 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 C10orf113Q5VZT2 155 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 SUMO4Q6EEV6 95 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 ZNF680Q8NEM1 530 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 FRZBQ92765 325 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 ODF3Q96PU9 254 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 BCL7BQ9BQE9 202 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 FLVCR2Q9UPI3 526 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 FUT9Q9Y231 359 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 RCL1Q9Y2P8 373 aaKnown RBP5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 KLF12Q9Y4X4 402 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 ICOSQ9Y6W8 199 aa5.3□□□□□ -1.56
SMCHD1-210ENST00000583800 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 A0A087WTM6 91 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 L7N2F9 121 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 M0R3E3 92 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 ZNF324O75467 553 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 OR4E1P0C645 316 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 HERV-K104P63124 156 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 CD300CQ08708 224 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 IAH1Q2TAA2 248 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 MIC13Q5XKP0 118 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 ERASQ7Z444 233 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 EIF4E3Q8N5X7 224 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 DEDD2Q8WXF8 326 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 C18orf15Q96N68 181 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 ALKBH7Q9BT30 221 aaPredicted RBP5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 MRPL16Q9NX20 251 aaKnown RBP5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 MDFICQ9P1T7 246 aa5.29□□□□□ -1.56
SMCHD1-210ENST00000583800 C7orf66A4D0T2 115 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 KLLNB2CW77 178 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 SPINK4O60575 86 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 NDUFB6O95139 128 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 IFNA5P01569 189 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 SLC25A5P05141 298 aaKnown RBP5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 TCL1AP56279 114 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 TAS2R30P59541 319 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 Q6ZQT7 251 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 ST6GAL2Q96JF0 529 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 GSKIPQ9P0R6 139 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 TP53TG3Q9ULZ0 132 aa5.28□□□□□ -1.56
SMCHD1-210ENST00000583800 TRBV19A0A075B6N1 114 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 CCSO14618 274 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 ZNF253O75346 499 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 RNASE4P34096 147 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 CRYBA4P53673 196 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 GUK1Q16774 197 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 PRR9Q5T870 116 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 LYPD5Q6UWN5 251 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 Q6ZRG5 221 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 NFE4Q86UQ8 179 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 WFDC10BQ8IUB3 73 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 OR11H4Q8NGC9 324 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 MRPL53Q96EL3 112 aaKnown RBP5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 FAM19A4Q96LR4 140 aa5.27□□□□□ -1.57
SMCHD1-210ENST00000583800 SGK494Q96LW2 274 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms