RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PRR9Q5T870 116 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 FAM222AQ5U5X8 452 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 ZNF493Q6ZR52 646 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 C9orf62Q8N4C0 152 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 APLNQ9ULZ1 77 aa17.71■□□□□ 0.43
TSEN54-209ENST00000583454 TEX48A0A1B0GUV7 120 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 SERTM2A0A1B0GWG4 89 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 TCRAP04437 139 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 Q6ZTC4 211 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 SLC51BQ86UW2 128 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 FAM213BQ8TBF2 198 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 PYGO2Q9BRQ0 406 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 EPDR1Q9UM22 224 aa17.7■□□□□ 0.42
TSEN54-209ENST00000583454 C11orf94C9JXX5 98 aa17.69■□□□□ 0.42
TSEN54-209ENST00000583454 HTN1P15515 57 aa17.69■□□□□ 0.42
TSEN54-209ENST00000583454 TCTAP57738 103 aa17.69■□□□□ 0.42
TSEN54-209ENST00000583454 ZFP69Q49AA0 526 aa17.69■□□□□ 0.42
TSEN54-209ENST00000583454 RNASE8Q8TDE3 154 aaKnown RBP17.69■□□□□ 0.42
TSEN54-209ENST00000583454 C16orf74Q96GX8 76 aa17.69■□□□□ 0.42
TSEN54-209ENST00000583454 LINC00467Q9BRT7 94 aa17.69■□□□□ 0.42
TSEN54-209ENST00000583454 FAM74A7A6NL05 159 aa17.68■□□□□ 0.42
TSEN54-209ENST00000583454 KIAA1109Q2LD37 5005 aa17.68■□□□□ 0.42
TSEN54-209ENST00000583454 EIF5AL1Q6IS14 154 aaKnown RBP17.68■□□□□ 0.42
TSEN54-209ENST00000583454 TMEM263Q8WUH6 116 aaKnown RBP17.68■□□□□ 0.42
TSEN54-209ENST00000583454 SFT2D1Q8WV19 159 aa17.68■□□□□ 0.42
TSEN54-209ENST00000583454 NKX6-2Q9C056 277 aaPredicted RBP17.68■□□□□ 0.42
TSEN54-209ENST00000583454 TRAV8-1A0A0A6YYK1 113 aa17.67■□□□□ 0.42
TSEN54-209ENST00000583454 UBE2G2P60604 165 aa17.67■□□□□ 0.42
TSEN54-209ENST00000583454 ZNF767PQ75MW2 155 aa17.67■□□□□ 0.42
TSEN54-209ENST00000583454 LYRM9A8MSI8 78 aa17.66■□□□□ 0.42
TSEN54-209ENST00000583454 RAB5CP51148 216 aa17.66■□□□□ 0.42
TSEN54-209ENST00000583454 CCDC28AQ8IWP9 274 aa17.66■□□□□ 0.42
TSEN54-209ENST00000583454 TVP23CQ96ET8 276 aa17.66■□□□□ 0.42
TSEN54-209ENST00000583454 TRAV10A0A0B4J240 114 aa17.65■□□□□ 0.42
TSEN54-209ENST00000583454 K7EQM0 130 aa17.65■□□□□ 0.42
TSEN54-209ENST00000583454 Q6ZQT7 251 aa17.65■□□□□ 0.42
TSEN54-209ENST00000583454 ATG101Q9BSB4 218 aa17.65■□□□□ 0.42
TSEN54-209ENST00000583454 KRTAP17-1Q9BYP8 105 aa17.65■□□□□ 0.42
TSEN54-209ENST00000583454 PKHD1P08F94 4074 aa17.65■□□□□ 0.42
TSEN54-209ENST00000583454 IGLL5B9A064 214 aa17.64■□□□□ 0.41
TSEN54-209ENST00000583454 IGLV2-11P01706 119 aa17.64■□□□□ 0.41
TSEN54-209ENST00000583454 H2AFB1P0C5Y9 115 aa17.64■□□□□ 0.41
TSEN54-209ENST00000583454 CYB561D1Q8N8Q1 229 aa17.64■□□□□ 0.41
TSEN54-209ENST00000583454 ARL2-SNX15V9GYD0 113 aa17.64■□□□□ 0.41
TSEN54-209ENST00000583454 ANXA2RQ3ZCQ2 193 aa17.63■□□□□ 0.41
TSEN54-209ENST00000583454 Q6AWC8 147 aa17.63■□□□□ 0.41
TSEN54-209ENST00000583454 EIF4E3Q8N5X7 224 aaKnown RBP17.63■□□□□ 0.41
TSEN54-209ENST00000583454 TIMM8BQ9Y5J9 83 aaPredicted RBP17.63■□□□□ 0.41
TSEN54-209ENST00000583454 FBLL1A6NHQ2 334 aaKnown RBP17.62■□□□□ 0.41
TSEN54-209ENST00000583454 IFNA7P01567 189 aa17.62■□□□□ 0.41
TSEN54-209ENST00000583454 SULT1A2P50226 295 aa17.62■□□□□ 0.41
TSEN54-209ENST00000583454 TMEM75Q8N9X5 138 aa17.62■□□□□ 0.41
TSEN54-209ENST00000583454 SGK494Q96LW2 274 aa17.62■□□□□ 0.41
TSEN54-209ENST00000583454 TREM1Q9NP99 234 aa17.62■□□□□ 0.41
TSEN54-209ENST00000583454 PSG8Q9UQ74 426 aa17.62■□□□□ 0.41
TSEN54-209ENST00000583454 TRAV1-1A0A0B4J248 108 aa17.61■□□□□ 0.41
TSEN54-209ENST00000583454 HIST1H2BAQ96A08 127 aa17.61■□□□□ 0.41
TSEN54-209ENST00000583454 IGHV1OR15-1A0A075B7D0 117 aa17.6■□□□□ 0.41
TSEN54-209ENST00000583454 DEFB131BA0A096LNP1 70 aa17.6■□□□□ 0.41
TSEN54-209ENST00000583454 DAD1P61803 113 aa17.6■□□□□ 0.41
TSEN54-209ENST00000583454 FLI1Q01543 452 aaPredicted RBP17.6■□□□□ 0.41
TSEN54-209ENST00000583454 NOP10Q9NPE3 64 aaKnown RBP17.6■□□□□ 0.41
TSEN54-209ENST00000583454 A0A1B0GV50 99 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 PEX7O00628 323 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 RGS13O14921 159 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 C11orf72Q8NBR9 251 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 ZNF680Q8NEM1 530 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 LINC00479Q96M42 142 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 TCEAL7Q9BRU2 100 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 NDFIP1Q9BT67 221 aa17.59■□□□□ 0.41
TSEN54-209ENST00000583454 PCLOQ9Y6V0 5065 aa17.58■□□□□ 0.41
TSEN54-209ENST00000583454 IGHV4-4A0A075B6R2 117 aa17.58■□□□□ 0.4
TSEN54-209ENST00000583454 CBY3A6NI87 242 aa17.58■□□□□ 0.4
TSEN54-209ENST00000583454 PAGE4O60829 102 aa17.58■□□□□ 0.4
TSEN54-209ENST00000583454 DAZ2Q13117 558 aaKnown RBP17.58■□□□□ 0.4
TSEN54-209ENST00000583454 CST9LP1Q5W188 147 aa17.58■□□□□ 0.4
TSEN54-209ENST00000583454 PKD1P98161 4303 aa17.58■□□□□ 0.4
TSEN54-209ENST00000583454 SNURFLB1AK76 121 aa17.57■□□□□ 0.4
TSEN54-209ENST00000583454 PPT1P50897 306 aa17.57■□□□□ 0.4
TSEN54-209ENST00000583454 NKX2-5P52952 324 aaPredicted RBP17.57■□□□□ 0.4
TSEN54-209ENST00000583454 PRNTQ86SH4 94 aa17.57■□□□□ 0.4
TSEN54-209ENST00000583454 LINC00612Q8N6U2 182 aa17.57■□□□□ 0.4
TSEN54-209ENST00000583454 TP53TG3Q9ULZ0 132 aa17.57■□□□□ 0.4
TSEN54-209ENST00000583454 TRAV34A0A0B4J273 112 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 DEFB130BP0DP73 79 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 DEFB130AP0DP74 79 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 ATP5G3P48201 142 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 CCL20P78556 96 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 SAPCD1Q5SSQ6 148 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 IBA57Q5T440 356 aaKnown RBP17.56■□□□□ 0.4
TSEN54-209ENST00000583454 GSN-AS1Q9NRJ2 163 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 KLF12Q9Y4X4 402 aa17.56■□□□□ 0.4
TSEN54-209ENST00000583454 TRAV21A0A0B4J279 112 aa17.55■□□□□ 0.4
TSEN54-209ENST00000583454 F6UZH7 168 aa17.55■□□□□ 0.4
TSEN54-209ENST00000583454 TDRG1Q3Y452 100 aa17.55■□□□□ 0.4
TSEN54-209ENST00000583454 C8orf49Q96NF6 230 aa17.55■□□□□ 0.4
TSEN54-209ENST00000583454 MUC21Q5SSG8 566 aa17.54■□□□□ 0.4
TSEN54-209ENST00000583454 DYNC1H1Q14204 4646 aaKnown RBP17.53■□□□□ 0.4
TSEN54-209ENST00000583454 ZNF80P51504 273 aaPredicted RBP17.53■□□□□ 0.4
TSEN54-209ENST00000583454 TCL1AP56279 114 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms