RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 GGTLC3B5MD39 225 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 IGLL5B9A064 214 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 TCRAP04437 139 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 RNASE4P34096 147 aaKnown RBP8.93□□□□□ -0.98
SNORD55-201ENST00000581525 DAD1P61803 113 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 EIF5AP63241 154 aaKnown RBP8.93□□□□□ -0.98
SNORD55-201ENST00000581525 TDRG1Q3Y452 100 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 IBA57Q5T440 356 aaKnown RBP8.93□□□□□ -0.98
SNORD55-201ENST00000581525 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 HYLS1Q96M11 299 aa8.93□□□□□ -0.98
SNORD55-201ENST00000581525 FBLL1A6NHQ2 334 aaKnown RBP8.92□□□□□ -0.98
SNORD55-201ENST00000581525 J3KRW8 73 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 FHITP49789 147 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 DPPA3Q6W0C5 159 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 Q6ZQT7 251 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 GOLT1AQ6ZVE7 132 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 Q8TAT8 98 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 ZNF471Q9BX82 626 aaPredicted RBP8.92□□□□□ -0.98
SNORD55-201ENST00000581525 TMPRSS5Q9H3S3 457 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
SNORD55-201ENST00000581525 IGHV1OR15-1A0A075B7D0 117 aa8.91□□□□□ -0.98
SNORD55-201ENST00000581525 FAM74A7A6NL05 159 aa8.91□□□□□ -0.98
SNORD55-201ENST00000581525 HTN1P15515 57 aa8.91□□□□□ -0.98
SNORD55-201ENST00000581525 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
SNORD55-201ENST00000581525 NOP10Q9NPE3 64 aaKnown RBP8.91□□□□□ -0.98
SNORD55-201ENST00000581525 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 MAP1LC3B2A6NCE7 125 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 TPT1P13693 172 aaKnown RBP8.9□□□□□ -0.98
SNORD55-201ENST00000581525 TCL1AP56279 114 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 GNG5P63218 68 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 CYB561D1Q8N8Q1 229 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 ATG101Q9BSB4 218 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 NDUFAF3Q9BU61 184 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 MAP1LC3BQ9GZQ8 125 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 KLF12Q9Y4X4 402 aa8.9□□□□□ -0.98
SNORD55-201ENST00000581525 DNAH10Q8IVF4 4471 aa8.9□□□□□ -0.99
SNORD55-201ENST00000581525 SNURFLB1AK76 121 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 K7EQM0 130 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 SPINK4O60575 86 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 ATP5G1P05496 136 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 ATP5G3P48201 142 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 LGALS9BQ3B8N2 356 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 HIST1H2BAQ96A08 127 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 TCEAL7Q9BRU2 100 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 PSG8Q9UQ74 426 aa8.89□□□□□ -0.99
SNORD55-201ENST00000581525 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 LY6G6CO95867 125 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 DEFB130BP0DP73 79 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 DEFB130AP0DP74 79 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 RAB5CP51148 216 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 FGF8P55075 233 aaPredicted RBP8.88□□□□□ -0.99
SNORD55-201ENST00000581525 FLI1Q01543 452 aaPredicted RBP8.88□□□□□ -0.99
SNORD55-201ENST00000581525 TREM1Q9NP99 234 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 GSN-AS1Q9NRJ2 163 aa8.88□□□□□ -0.99
SNORD55-201ENST00000581525 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 TRBV6-1A0A0K0K1D8 114 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 RGS13O14921 159 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 PFDN1O60925 122 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 AKAP14Q86UN6 197 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 SLC51BQ86UW2 128 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 SPXQ9BT56 116 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
SNORD55-201ENST00000581525 H3BNG1 76 aa8.86□□□□□ -0.99
SNORD55-201ENST00000581525 SULT1A2P50226 295 aa8.86□□□□□ -0.99
SNORD55-201ENST00000581525 ZNF80P51504 273 aaPredicted RBP8.86□□□□□ -0.99
SNORD55-201ENST00000581525 EIF5AL1Q6IS14 154 aaKnown RBP8.86□□□□□ -0.99
SNORD55-201ENST00000581525 Q6ZTI0 123 aa8.86□□□□□ -0.99
SNORD55-201ENST00000581525 SFT2D1Q8WV19 159 aa8.86□□□□□ -0.99
SNORD55-201ENST00000581525 LINC00479Q96M42 142 aa8.86□□□□□ -0.99
SNORD55-201ENST00000581525 RPH3ALQ9UNE2 315 aa8.86□□□□□ -0.99
SNORD55-201ENST00000581525 GAGE12BA1L429 117 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 PEX7O00628 323 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 GAGE7O76087 117 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 H2AFB1P0C5Y9 115 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 GAGE12FP0CL80 117 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 GAGE12GP0CL81 117 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 GAGE12IP0CL82 117 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 P0DMU3 169 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 FAM231AP0DMU4 169 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 FAM231CP0DMU5 169 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 PPT1P50897 306 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 UBE2G2P60604 165 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 RNF212Q495C1 297 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 TMEM88Q6PEY1 159 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 FAM159AQ6UWV7 190 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 IQCF2Q8IXL9 164 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 C9orf62Q8N4C0 152 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 RASL10AQ92737 203 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 NDFIP1Q9BT67 221 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
SNORD55-201ENST00000581525 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms