RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 GCGP01275 180 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 IGKV3-20P01619 116 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 IGLV1-51P01701 117 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 SNRPD3P62318 126 aaKnown RBP7.47□□□□□ -1.21
CRLF3-202ENST00000577725 PNRC1Q12796 327 aaPredicted RBP7.47□□□□□ -1.21
CRLF3-202ENST00000577725 TMEM88Q6PEY1 159 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 LINC00322Q6ZN03 302 aaPredicted RBP7.47□□□□□ -1.21
CRLF3-202ENST00000577725 OR10J6PQ8NGY7 276 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
CRLF3-202ENST00000577725 MAP6D1Q9H9H5 199 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 CLEC5AQ9NY25 188 aa7.47□□□□□ -1.21
CRLF3-202ENST00000577725 TRAV25A0A0B4J276 109 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 RBAKDNA6NC62 111 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 OR4C46A6NHA9 309 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 NPIPB6E9PJ23 425 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 CT45A10P0DMU9 189 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 ZNF138P52744 262 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 BTN1A1Q13410 526 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 RHEBQ15382 184 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 TMEM78Q5T7P6 136 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 SAMD13Q5VXD3 122 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 APRG1Q8IVJ8 170 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 TMEM183AQ8IXX5 376 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 ARL6IP6Q8N6S5 226 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 WFDC9Q8NEX5 89 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 PRR25Q96S07 402 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 SPAG8Q99932 426 aaPredicted RBP7.46□□□□□ -1.22
CRLF3-202ENST00000577725 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 ZNF256Q9Y2P7 627 aaPredicted RBP7.46□□□□□ -1.22
CRLF3-202ENST00000577725 LY96Q9Y6Y9 160 aa7.46□□□□□ -1.22
CRLF3-202ENST00000577725 TRAV2A0A0B4J234 112 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 A0A0J9YX75 114 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
CRLF3-202ENST00000577725 ODF3L2Q3SX64 289 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 PRR9Q5T870 116 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 C9orf47Q6ZRZ4 202 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
CRLF3-202ENST00000577725 OR10G8Q8NGN5 311 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 SFRP2Q96HF1 295 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 ZNF492Q9P255 531 aa7.45□□□□□ -1.22
CRLF3-202ENST00000577725 FRAS1Q86XX4 4008 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 STARD9Q9P2P6 4700 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 B4DEV8 164 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 H7BYZ3 331 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 MT-ND4LP03901 98 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 CD7P09564 240 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 CRIP1P50238 77 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 FXYD7P58549 80 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 ERVFC1-1P60608 527 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 EGFEM1PQ0D2K5 195 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 ACTL10Q5JWF8 245 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 C9orf66Q5T8R8 295 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 EBLN2Q6P2I7 272 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 Q6ZQT7 251 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 NUDT10Q8NFP7 164 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 OR4B1Q8NGF8 309 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 NUDT11Q96G61 164 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 NDFIP1Q9BT67 221 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 SAV1Q9H4B6 383 aaPredicted RBP7.44□□□□□ -1.22
CRLF3-202ENST00000577725 ZFP30Q9Y2G7 519 aa7.44□□□□□ -1.22
CRLF3-202ENST00000577725 ZNF705GA8MUZ8 300 aaPredicted RBP7.43□□□□□ -1.22
CRLF3-202ENST00000577725 GATCO43716 136 aaKnown RBP7.43□□□□□ -1.22
CRLF3-202ENST00000577725 SH2D1AO60880 128 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
CRLF3-202ENST00000577725 RPL19P84098 196 aaKnown RBP7.43□□□□□ -1.22
CRLF3-202ENST00000577725 SMUG1Q53HV7 270 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 SAPCD1Q5SSQ6 148 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 FOXI2Q6ZQN5 318 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 OR2K2Q8NGT1 345 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 LINC00477Q96M19 166 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 OSTCQ9NRP0 149 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 URGCP-MRPS24S4R325 110 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 V9GYV3 84 aa7.43□□□□□ -1.22
CRLF3-202ENST00000577725 A0A087WWC5 75 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 TMSB15BA0A087X1C1 80 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 C19orf71A6NCJ1 209 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 FBLL1A6NHQ2 334 aaKnown RBP7.42□□□□□ -1.22
CRLF3-202ENST00000577725 OR11H12B2RN74 326 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 GZMBP10144 247 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 TCL1AP56279 114 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 IBA57Q5T440 356 aaKnown RBP7.42□□□□□ -1.22
CRLF3-202ENST00000577725 ZFAND2AQ8N6M9 145 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 C15orf54Q8N8G6 183 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 DAZAP1Q96EP5 407 aaKnown RBP7.42□□□□□ -1.22
CRLF3-202ENST00000577725 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 SMCO4Q9NRQ5 59 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 PPP1R14DQ9NXH3 145 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 KIAA1109Q2LD37 5005 aa7.42□□□□□ -1.22
CRLF3-202ENST00000577725 H3BMM0 161 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 M0R2Z0 102 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 PPP1R2P9O14990 202 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 DUSP14O95147 198 aaKnown RBP7.41□□□□□ -1.22
CRLF3-202ENST00000577725 P01737 135 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 HLA-DRB4P13762 266 aa7.41□□□□□ -1.22
CRLF3-202ENST00000577725 RNASE4P34096 147 aaKnown RBP7.41□□□□□ -1.22
CRLF3-202ENST00000577725 SPINK13Q1W4C9 94 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms