RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GNG5P63218 68 aa16.61■□□□□ 0.25
SNF8-217ENST00000576353 A0A1W2PRE2 83 aa16.6■□□□□ 0.25
SNF8-217ENST00000576353 BCL2L11O43521 198 aa16.6■□□□□ 0.25
SNF8-217ENST00000576353 EIF5AP63241 154 aaKnown RBP16.6■□□□□ 0.25
SNF8-217ENST00000576353 LINC00612Q8N6U2 182 aa16.6■□□□□ 0.25
SNF8-217ENST00000576353 F5H768 121 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 TCRAP04437 139 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 SEC11BP0C7V7 166 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 P0DMU3 169 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 FAM231AP0DMU4 169 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 FAM231CP0DMU5 169 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 Q6AWC8 147 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 TMEM88Q6PEY1 159 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 Q6ZNX1 250 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 ZNF471Q9BX82 626 aaPredicted RBP16.59■□□□□ 0.25
SNF8-217ENST00000576353 GSN-AS1Q9NRJ2 163 aa16.59■□□□□ 0.25
SNF8-217ENST00000576353 ALMS1Q8TCU4 4167 aa16.58■□□□□ 0.25
SNF8-217ENST00000576353 GGTLC3B5MD39 225 aa16.58■□□□□ 0.24
SNF8-217ENST00000576353 IBA57Q5T440 356 aaKnown RBP16.58■□□□□ 0.24
SNF8-217ENST00000576353 Q6ZQT7 251 aa16.58■□□□□ 0.24
SNF8-217ENST00000576353 C11orf72Q8NBR9 251 aa16.58■□□□□ 0.24
SNF8-217ENST00000576353 EPDR1Q9UM22 224 aa16.58■□□□□ 0.24
SNF8-217ENST00000576353 TRAV8-1A0A0A6YYK1 113 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 GAGE12BA1L429 117 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 PFDN1O60925 122 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 GAGE7O76087 117 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 GAGE12FP0CL80 117 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 GAGE12GP0CL81 117 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 GAGE12IP0CL82 117 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 STOML3Q8TAV4 291 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 NDFIP1Q9BT67 221 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 NKX6-2Q9C056 277 aaPredicted RBP16.57■□□□□ 0.24
SNF8-217ENST00000576353 TMPRSS5Q9H3S3 457 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 TREM1Q9NP99 234 aa16.57■□□□□ 0.24
SNF8-217ENST00000576353 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 UMAD1C9J7I0 102 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 FGF8P55075 233 aaPredicted RBP16.56■□□□□ 0.24
SNF8-217ENST00000576353 TMUB2Q71RG4 321 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 TCTE3Q8IZS6 198 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 C15orf53Q8NAA6 179 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 TP53TG3Q9ULZ0 132 aa16.56■□□□□ 0.24
SNF8-217ENST00000576353 FBLL1A6NHQ2 334 aaKnown RBP16.55■□□□□ 0.24
SNF8-217ENST00000576353 TCL1AP56279 114 aa16.55■□□□□ 0.24
SNF8-217ENST00000576353 FAM159AQ6UWV7 190 aa16.55■□□□□ 0.24
SNF8-217ENST00000576353 CYB561D1Q8N8Q1 229 aa16.55■□□□□ 0.24
SNF8-217ENST00000576353 TVP23CQ96ET8 276 aa16.55■□□□□ 0.24
SNF8-217ENST00000576353 ATG101Q9BSB4 218 aa16.55■□□□□ 0.24
SNF8-217ENST00000576353 MUC21Q5SSG8 566 aa16.54■□□□□ 0.24
SNF8-217ENST00000576353 Q6ZTI0 123 aa16.54■□□□□ 0.24
SNF8-217ENST00000576353 SGK494Q96LW2 274 aa16.54■□□□□ 0.24
SNF8-217ENST00000576353 KLF12Q9Y4X4 402 aa16.54■□□□□ 0.24
SNF8-217ENST00000576353 DNAH1Q9P2D7 4330 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 TRAV21A0A0B4J279 112 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 IFNA7P01567 189 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 TPT1P13693 172 aaKnown RBP16.53■□□□□ 0.24
SNF8-217ENST00000576353 UBE2G2P60604 165 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 ZNF415Q09FC8 603 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 POM121L12Q8N7R1 296 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 PSG8Q9UQ74 426 aa16.53■□□□□ 0.24
SNF8-217ENST00000576353 TRGV2A0A075B6R0 118 aa16.52■□□□□ 0.24
SNF8-217ENST00000576353 TRGV1A0A0A0MS02 117 aa16.52■□□□□ 0.24
SNF8-217ENST00000576353 FLI1Q01543 452 aaPredicted RBP16.52■□□□□ 0.24
SNF8-217ENST00000576353 TMEM75Q8N9X5 138 aa16.52■□□□□ 0.24
SNF8-217ENST00000576353 C18orf15Q96N68 181 aa16.52■□□□□ 0.24
SNF8-217ENST00000576353 TRGV11A0A075B6L2 103 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 FAM74A7A6NL05 159 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 F6UZH7 168 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 SPINK4O60575 86 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 FHITP49789 147 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 OR5I1Q13606 314 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 LGALS9BQ3B8N2 356 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 TDRG1Q3Y452 100 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 DPPA3Q6W0C5 159 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 FAM213BQ8TBF2 198 aa16.51■□□□□ 0.23
SNF8-217ENST00000576353 IGLV2-11P01706 119 aa16.5■□□□□ 0.23
SNF8-217ENST00000576353 PPT1P50897 306 aa16.5■□□□□ 0.23
SNF8-217ENST00000576353 SAPCD1Q5SSQ6 148 aa16.5■□□□□ 0.23
SNF8-217ENST00000576353 PRNTQ86SH4 94 aa16.5■□□□□ 0.23
SNF8-217ENST00000576353 SFT2D1Q8WV19 159 aa16.5■□□□□ 0.23
SNF8-217ENST00000576353 NAGKQ9UJ70 344 aa16.5■□□□□ 0.23
SNF8-217ENST00000576353 HYDINQ4G0P3 5121 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 TMEM183BQ1AE95 376 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 ZFP69Q49AA0 526 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 UBE2DNLQ8IWF7 75 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 TMEM183AQ8IXX5 376 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 MBD3L1Q8WWY6 194 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 HIST1H2BAQ96A08 127 aa16.49■□□□□ 0.23
SNF8-217ENST00000576353 C1QBP02746 253 aa16.48■□□□□ 0.23
SNF8-217ENST00000576353 LGALSLQ3ZCW2 172 aaPredicted RBP16.48■□□□□ 0.23
SNF8-217ENST00000576353 RNF212Q495C1 297 aa16.48■□□□□ 0.23
SNF8-217ENST00000576353 EIF5AL1Q6IS14 154 aaKnown RBP16.48■□□□□ 0.23
SNF8-217ENST00000576353 KCNS1Q96KK3 526 aa16.48■□□□□ 0.23
SNF8-217ENST00000576353 SPXQ9BT56 116 aa16.48■□□□□ 0.23
SNF8-217ENST00000576353 MDFICQ9P1T7 246 aa16.48■□□□□ 0.23
SNF8-217ENST00000576353 PEX7O00628 323 aa16.47■□□□□ 0.23
SNF8-217ENST00000576353 NUDT3O95989 172 aa16.47■□□□□ 0.23
SNF8-217ENST00000576353 SMUG1Q53HV7 270 aa16.47■□□□□ 0.23
SNF8-217ENST00000576353 AKAP14Q86UN6 197 aa16.47■□□□□ 0.23
SNF8-217ENST00000576353 C8orf49Q96NF6 230 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms