RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 GPN1Q9HCN4 374 aaPredicted RBP5.99□□□□□ -1.45
SMG6-218ENST00000575454 ZNF492Q9P255 531 aa5.99□□□□□ -1.45
SMG6-218ENST00000575454 LRP2P98164 4655 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 NDUFB4O95168 129 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 RPL29P47914 159 aaKnown RBP5.98□□□□□ -1.45
SMG6-218ENST00000575454 ARL16Q0P5N6 197 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 OR10J3Q5JRS4 329 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 MIC13Q5XKP0 118 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 FAM159AQ6UWV7 190 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 BCL7BQ9BQE9 202 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 SLC39A9Q9NUM3 307 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 UQCC1Q9NVA1 299 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 GSKIPQ9P0R6 139 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 COX11Q9Y6N1 276 aa5.98□□□□□ -1.45
SMG6-218ENST00000575454 TRAV8-3A0A0A6YYJ7 113 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 C7orf66A4D0T2 115 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 L7N2F9 121 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 CIDEAO60543 219 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 CSN1S1P47710 185 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 VAMP2P63027 116 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 ZNF266Q14584 549 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 ZNF846Q147U1 533 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 TOR2AQ5JU69 321 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 PRR9Q5T870 116 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 EXOC3-AS1Q8N2X6 119 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 CHAC2Q8WUX2 184 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 CHAC1Q9BUX1 264 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 WDR83OSQ9Y284 106 aa5.97□□□□□ -1.45
SMG6-218ENST00000575454 IGKV2-40A0A087WW87 121 aaPredicted RBP5.96□□□□□ -1.46
SMG6-218ENST00000575454 RBAKDNA6NC62 111 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 M0R2P5 195 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 RS1O15537 224 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 IGKV2D-40P01614 121 aaPredicted RBP5.96□□□□□ -1.46
SMG6-218ENST00000575454 BCAP31P51572 246 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 CAV2P51636 162 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 TMBIM6P55061 237 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 BAK1Q16611 211 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 TMEM183BQ1AE95 376 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 MUC21Q5SSG8 566 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 LELP1Q5T871 98 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 FAM122CQ6P4D5 195 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 SCXQ7RTU7 201 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 TMEM183AQ8IXX5 376 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 ATP5SQ99766 215 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 PRADC1Q9BSG0 188 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 SLIRPQ9GZT3 109 aaKnown RBP5.96□□□□□ -1.46
SMG6-218ENST00000575454 LENEPQ9Y5L5 61 aa5.96□□□□□ -1.46
SMG6-218ENST00000575454 NAP1L6A6NFF2 107 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 NOL3O60936 208 aaKnown RBP5.95□□□□□ -1.46
SMG6-218ENST00000575454 NDUFB6O95139 128 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 IGHV3-30P01768 117 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 IGHV3-33P01772 117 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 MBPP02686 304 aaPredicted RBP5.95□□□□□ -1.46
SMG6-218ENST00000575454 NBEAP1P0C6P0 100 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 SMIM18P0DKX4 95 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 IGHV3-30-3P0DP02 117 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 IGHV3-30-5P0DP03 117 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 PYYP10082 97 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 GATA1P15976 413 aaPredicted RBP5.95□□□□□ -1.46
SMG6-218ENST00000575454 S100A11P31949 105 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 HBG1P69891 147 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 HBG2P69892 147 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 BAXQ07812 192 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 VWC2Q2TAL6 325 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 Q6AWC8 147 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 Q6ZQT7 251 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 Q8N976 141 aa5.95□□□□□ -1.46
SMG6-218ENST00000575454 MRPS26Q9BYN8 205 aaKnown RBP5.95□□□□□ -1.46
SMG6-218ENST00000575454 LOC100131303A0A0U1RQF7 123 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 TRBV6-4A0A1B0GX49 114 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 RBFOX3A6NFN3 312 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 FBLL1A6NHQ2 334 aaKnown RBP5.94□□□□□ -1.46
SMG6-218ENST00000575454 CST7O76096 145 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 IGLV2-8P01709 118 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 SEC11BP0C7V7 166 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 PVALBP20472 110 aaPredicted RBP5.94□□□□□ -1.46
SMG6-218ENST00000575454 INPP1P49441 399 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 RHOHQ15669 191 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 ATP6V1FQ16864 119 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 CNPY1Q3B7I2 92 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 ATP6V0E2Q8NHE4 81 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 MITD1Q8WV92 249 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 RMI2Q96E14 147 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 GTSF1LQ9H1H1 148 aa5.94□□□□□ -1.46
SMG6-218ENST00000575454 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.93□□□□□ -1.46
SMG6-218ENST00000575454 UBE2L5PA0A1B0GUS4 154 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 GGTLC3B5MD39 225 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 S100A5P33763 92 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 SULT1A1P50225 295 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
SMG6-218ENST00000575454 STX12Q86Y82 276 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 SLC25A29Q8N8R3 303 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 Q8TAT8 98 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 TMED6Q8WW62 240 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 OR51M1Q9H341 326 aa5.93□□□□□ -1.46
SMG6-218ENST00000575454 TRAV8-1A0A0A6YYK1 113 aa5.92□□□□□ -1.46
SMG6-218ENST00000575454 TRAV21A0A0B4J279 112 aa5.92□□□□□ -1.46
SMG6-218ENST00000575454 IGHV3-16A0A0C4DH30 117 aa5.92□□□□□ -1.46
SMG6-218ENST00000575454 CENPXA8MT69 81 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms