RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 KIR3DS1Q14943 382 aa6.87□□□□□ -1.31
CCDC40-214ENST00000575431 Q6AWC8 147 aa6.87□□□□□ -1.31
CCDC40-214ENST00000575431 EIF4E3Q8N5X7 224 aaKnown RBP6.87□□□□□ -1.31
CCDC40-214ENST00000575431 ZNF680Q8NEM1 530 aa6.87□□□□□ -1.31
CCDC40-214ENST00000575431 FMC1Q96HJ9 113 aa6.87□□□□□ -1.31
CCDC40-214ENST00000575431 DKK2Q9UBU2 259 aa6.87□□□□□ -1.31
CCDC40-214ENST00000575431 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 TRAV21A0A0B4J279 112 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 TRBV6-1A0A0K0K1D8 114 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 SNURFLB1AK76 121 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 IGLV2-11P01706 119 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 HTN1P15515 57 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 EMP1P54849 157 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 UBE2G1P62253 170 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 BTN1A1Q13410 526 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 ANXA2RQ3ZCQ2 193 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 CASC10Q5T4H9 136 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 FAM159AQ6UWV7 190 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 RNASE8Q8TDE3 154 aaKnown RBP6.86□□□□□ -1.31
CCDC40-214ENST00000575431 GNG13Q9P2W3 67 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 ZFP30Q9Y2G7 519 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 KLK5Q9Y337 293 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-214ENST00000575431 KLF12Q9Y4X4 402 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 TIMM8BQ9Y5J9 83 aaPredicted RBP6.86□□□□□ -1.31
CCDC40-214ENST00000575431 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
CCDC40-214ENST00000575431 TGP01266 2768 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 IGHV1OR15-1A0A075B7D0 117 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 A0A1B0GV50 99 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 CBY3A6NI87 242 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 AZU1P20160 251 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 AKR1C3P42330 323 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 ATP5G3P48201 142 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 TCTAP57738 103 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 TMEM183BQ1AE95 376 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 TDRG1Q3Y452 100 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 IBA57Q5T440 356 aaKnown RBP6.85□□□□□ -1.31
CCDC40-214ENST00000575431 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
CCDC40-214ENST00000575431 PRNTQ86SH4 94 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 KCNS1Q96KK3 526 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 BOLA1Q9Y3E2 137 aa6.85□□□□□ -1.31
CCDC40-214ENST00000575431 TRGV11A0A075B6L2 103 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 TRAV10A0A0B4J240 114 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 PLAC8L1A1L4L8 177 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 PFN1P07737 140 aaKnown RBP6.84□□□□□ -1.31
CCDC40-214ENST00000575431 NANOS2P60321 138 aaKnown RBP6.84□□□□□ -1.31
CCDC40-214ENST00000575431 CCL20P78556 96 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 MEF2BQ02080 365 aaPredicted RBP6.84□□□□□ -1.31
CCDC40-214ENST00000575431 DAZ2Q13117 558 aaKnown RBP6.84□□□□□ -1.31
CCDC40-214ENST00000575431 C12orf74Q32Q52 190 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 PRR9Q5T870 116 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 ZFAND6Q6FIF0 208 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 COX8CQ7Z4L0 72 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 PHLDA1Q8WV24 401 aaPredicted RBP6.84□□□□□ -1.31
CCDC40-214ENST00000575431 TVP23CQ96ET8 276 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 COL7A1Q02388 2944 aa6.84□□□□□ -1.31
CCDC40-214ENST00000575431 TRAV34A0A0B4J273 112 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 PDE6DO43924 150 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 GCGP01275 180 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 BCL2P10415 239 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 DAD1P61803 113 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 Q86TA4 180 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 C2CD4CQ8TF44 421 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 C11orf52Q96A22 123 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 LINC00479Q96M42 142 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 TP53TG3Q9ULZ0 132 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 CELA1Q9UNI1 258 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
CCDC40-214ENST00000575431 LTAP01374 205 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 PRM2P04554 102 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 TCL1AP56279 114 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 ZNF415Q09FC8 603 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 TEX261Q6UWH6 196 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 Q6ZTC4 211 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 TMEM183AQ8IXX5 376 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 C11orf72Q8NBR9 251 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 FAM210BQ96KR6 192 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 C8orf49Q96NF6 230 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 SPXQ9BT56 116 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 SDF2L1Q9HCN8 221 aa6.82□□□□□ -1.32
CCDC40-214ENST00000575431 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
CCDC40-214ENST00000575431 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 SCO2A0A1W2PP80 73 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 NDUFS6O75380 124 aaKnown RBP6.81□□□□□ -1.32
CCDC40-214ENST00000575431 ATP5G1P05496 136 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 DEFB130BP0DP73 79 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 DEFB130AP0DP74 79 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 MUC21Q5SSG8 566 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 BAGE2Q86Y30 109 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 LINC00612Q8N6U2 182 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 SMIM12Q96EX1 92 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 C18orf15Q96N68 181 aa6.81□□□□□ -1.32
CCDC40-214ENST00000575431 GSN-AS1Q9NRJ2 163 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms