RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RASL11AQ6T310 242 aa6.67□□□□□ -1.34
RPAIN-215ENST00000575112 ZNF491Q8N8L2 437 aa6.67□□□□□ -1.34
RPAIN-215ENST00000575112 KLF12Q9Y4X4 402 aa6.67□□□□□ -1.34
RPAIN-215ENST00000575112 PRAC2D3DTV9 90 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 IGLV1-47P01700 117 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 GCSHP23434 173 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 Q86TA4 180 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 PRELID3AQ96N28 172 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 FAM162BQ5T6X4 162 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 TMEM78Q5T7P6 136 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 OTORQ9NRC9 128 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 MSRB2Q9Y3D2 182 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 H3BUX3 64 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 Q6ZQT7 251 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 ATP5L2Q7Z4Y8 100 aa6.66□□□□□ -1.34
RPAIN-215ENST00000575112 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
RPAIN-215ENST00000575112 PEF1Q9UBV8 284 aaKnown RBP6.66□□□□□ -1.34
RPAIN-215ENST00000575112 H7C2G1 150 aa6.65□□□□□ -1.34
RPAIN-215ENST00000575112 SH2D1AO60880 128 aa6.65□□□□□ -1.34
RPAIN-215ENST00000575112 FMC1Q96HJ9 113 aa6.65□□□□□ -1.34
RPAIN-215ENST00000575112 LINC00477Q96M19 166 aa6.65□□□□□ -1.34
RPAIN-215ENST00000575112 SIGLEC8Q9NYZ4 499 aa6.65□□□□□ -1.34
RPAIN-215ENST00000575112 PRTN3P24158 256 aa6.65□□□□□ -1.34
RPAIN-215ENST00000575112 TRBV19A0A075B6N1 114 aa6.65□□□□□ -1.35
RPAIN-215ENST00000575112 A0A0G2JLM5 398 aa6.65□□□□□ -1.35
RPAIN-215ENST00000575112 TGFAP01135 160 aa6.65□□□□□ -1.35
RPAIN-215ENST00000575112 DLX6P56179 175 aa6.65□□□□□ -1.35
RPAIN-215ENST00000575112 GTSF1LQ9H1H1 148 aa6.65□□□□□ -1.35
RPAIN-215ENST00000575112 K7ERU9 68 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 FXYD2P54710 66 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 EMP1P54849 157 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 BLCAPP62952 87 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 Q1RN00 199 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 PET117Q6UWS5 81 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 IL17RELQ6ZVW7 336 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 CCL19Q99731 98 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 TEX48A0A1B0GUV7 120 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 H3BVH4 76 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 I3L2K1 104 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
RPAIN-215ENST00000575112 ATP5G2Q06055 141 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 OR10AG1Q8NH19 301 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 METTL26Q96S19 204 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 TMEM160Q9NX00 188 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 HSPB8Q9UJY1 196 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 G3V4G9 280 aa6.64□□□□□ -1.35
RPAIN-215ENST00000575112 RNASE4P34096 147 aaKnown RBP6.64□□□□□ -1.35
RPAIN-215ENST00000575112 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.63□□□□□ -1.35
RPAIN-215ENST00000575112 TMEM30BQ3MIR4 351 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 Q5PR19 223 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 ADAMTSL5Q6ZMM2 481 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 NEGR1Q7Z3B1 354 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 THAP8Q8NA92 274 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 HAX1O00165 279 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 NPYP01303 97 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 ATP5IP56385 69 aaPredicted RBP6.63□□□□□ -1.35
RPAIN-215ENST00000575112 C16orf54Q6UWD8 224 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 IGSF10Q6WRI0 2623 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 KAAG1Q9UBP8 84 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 NPIPB6E9PJ23 425 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 TRBV12-3P01733 135 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 SRSF9Q13242 221 aaKnown RBP eCLIP6.63□□□□□ -1.35
RPAIN-215ENST00000575112 PSG3Q16557 428 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 ZNF562Q6V9R5 426 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 OR2K2Q8NGT1 345 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 DPF1Q92782 380 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 DUX3Q96PT4 197 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 CHD6Q8TD26 2715 aa6.63□□□□□ -1.35
RPAIN-215ENST00000575112 IGHV4-38-2P0DP08 117 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 INSL3P51460 131 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 UCNP55089 124 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 SMAGPQ0VAQ4 97 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 LINC00311Q8N616 119 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 JKAMPQ9P055 326 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 SPCS1Q9Y6A9 102 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 A0A1W2PRX2 142 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 CIDEAO60543 219 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 EGR2P11161 476 aaPredicted RBP6.62□□□□□ -1.35
RPAIN-215ENST00000575112 PAX2Q02962 417 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 ZNF414Q96IQ9 312 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 FANCD2OSQ96PS1 177 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 IGHV7-81A0A0B4J1V7 117 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 IGHV4-61A0A0C4DH41 118 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 IGF1P05019 195 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 ZNF80P51504 273 aaPredicted RBP6.62□□□□□ -1.35
RPAIN-215ENST00000575112 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 ZNF575Q86XF7 245 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 CLUHP3Q96NS8 147 aa6.62□□□□□ -1.35
RPAIN-215ENST00000575112 K7EP34 96 aa6.61□□□□□ -1.35
RPAIN-215ENST00000575112 NPFFO15130 113 aa6.61□□□□□ -1.35
RPAIN-215ENST00000575112 NPFFR1Q9GZQ6 430 aa6.61□□□□□ -1.35
RPAIN-215ENST00000575112 IGHV3-73A0A0B4J1V6 119 aa6.61□□□□□ -1.35
RPAIN-215ENST00000575112 NDUFA3O95167 84 aa6.61□□□□□ -1.35
RPAIN-215ENST00000575112 ZNF688P0C7X2 276 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms