RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 GOLT1AQ6ZVE7 132 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 SSX7Q7RTT5 188 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 HYLS1Q96M11 299 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 ZNF471Q9BX82 626 aaPredicted RBP6.96□□□□□ -1.3
NDE1-210ENST00000574163 ARL2-SNX15V9GYD0 113 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
NDE1-210ENST00000574163 MAP1LC3B2A6NCE7 125 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 J3KRW8 73 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 K7EQM0 130 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 PFDN1O60925 122 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 C1QBP02746 253 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 TPT1P13693 172 aaKnown RBP6.95□□□□□ -1.3
NDE1-210ENST00000574163 CD300CQ08708 224 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 DAZ2Q13117 558 aaKnown RBP6.95□□□□□ -1.3
NDE1-210ENST00000574163 ANXA2RQ3ZCQ2 193 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 IBA57Q5T440 356 aaKnown RBP6.95□□□□□ -1.3
NDE1-210ENST00000574163 PRR9Q5T870 116 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 Q6AWC8 147 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 TMUB2Q71RG4 321 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 AKAP14Q86UN6 197 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 LINC00612Q8N6U2 182 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 NKX6-2Q9C056 277 aaPredicted RBP6.95□□□□□ -1.3
NDE1-210ENST00000574163 MAP1LC3BQ9GZQ8 125 aa6.95□□□□□ -1.3
NDE1-210ENST00000574163 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
NDE1-210ENST00000574163 RYR2Q92736 4967 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 IGHV4-4A0A075B6R2 117 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 SNURFLB1AK76 121 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 IGLL5B9A064 214 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 TCRAP04437 139 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 HTN1P15515 57 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 RNASE4P34096 147 aaKnown RBP6.94□□□□□ -1.3
NDE1-210ENST00000574163 LGALS9CQ6DKI2 356 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 ZNF767PQ75MW2 155 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 IQCF2Q8IXL9 164 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 EIF4E3Q8N5X7 224 aaKnown RBP6.94□□□□□ -1.3
NDE1-210ENST00000574163 CYB561D1Q8N8Q1 229 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 TMEM75Q8N9X5 138 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 NDFIP1Q9BT67 221 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 RPH3ALQ9UNE2 315 aa6.94□□□□□ -1.3
NDE1-210ENST00000574163 RYR3Q15413 4870 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 IGHV1OR15-1A0A075B7D0 117 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 RGS13O14921 159 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 PRM2P04554 102 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 FHITP49789 147 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 TCL1AP56279 114 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 GNG5P63218 68 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 EIF5AL1Q6IS14 154 aaKnown RBP6.93□□□□□ -1.3
NDE1-210ENST00000574163 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 C11orf72Q8NBR9 251 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 NDUFAF3Q9BU61 184 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 NOP10Q9NPE3 64 aaKnown RBP6.93□□□□□ -1.3
NDE1-210ENST00000574163 APLNQ9ULZ1 77 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 EPDR1Q9UM22 224 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 MUC4Q99102 2169 aa6.93□□□□□ -1.3
NDE1-210ENST00000574163 TRAV8-1A0A0A6YYK1 113 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 CBY3A6NI87 242 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 FAM74A7A6NL05 159 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 ATP5G1P05496 136 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 DEFB130BP0DP73 79 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 DEFB130AP0DP74 79 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 ATP5G3P48201 142 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 PPT1P50897 306 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 RAB5CP51148 216 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
NDE1-210ENST00000574163 SUMO1P63165 101 aaKnown RBP6.92□□□□□ -1.3
NDE1-210ENST00000574163 ZNF415Q09FC8 603 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 TDRG1Q3Y452 100 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 LGALSLQ3ZCW2 172 aaPredicted RBP6.92□□□□□ -1.3
NDE1-210ENST00000574163 FAM213BQ8TBF2 198 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 HIST1H2BAQ96A08 127 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 C18orf15Q96N68 181 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 TREM1Q9NP99 234 aa6.92□□□□□ -1.3
NDE1-210ENST00000574163 hCG_2014768A0A024R1R8 64 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 TRGV11A0A075B6L2 103 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 TRAV21A0A0B4J279 112 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 PEX7O00628 323 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 LY6G6CO95867 125 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 IFNA7P01567 189 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 FLI1Q01543 452 aaPredicted RBP6.91□□□□□ -1.3
NDE1-210ENST00000574163 ZFP69Q49AA0 526 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 SLC51BQ86UW2 128 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 C15orf53Q8NAA6 179 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 TVP23CQ96ET8 276 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 TMPRSS5Q9H3S3 457 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 TP53TG3Q9ULZ0 132 aa6.91□□□□□ -1.3
NDE1-210ENST00000574163 DNAH6Q9C0G6 4158 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 TRAV1-1A0A0B4J248 108 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 F6UZH7 168 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 HTN3P15516 51 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 UBE2G2P60604 165 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 LGALS9BQ3B8N2 356 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 SAPCD1Q5SSQ6 148 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 Q86TA4 180 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 SFT2D1Q8WV19 159 aa6.9□□□□□ -1.3
NDE1-210ENST00000574163 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
NDE1-210ENST00000574163 GSN-AS1Q9NRJ2 163 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms