RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 TMED6Q8WW62 240 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 TMPRSS5Q9H3S3 457 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 GSN-AS1Q9NRJ2 163 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 HYDINQ4G0P3 5121 aa14.62□□□□□ -0.07
CHMP6-204ENST00000572778 F5H768 121 aa14.61□□□□□ -0.07
CHMP6-204ENST00000572778 ATP5G1P05496 136 aa14.61□□□□□ -0.07
CHMP6-204ENST00000572778 ATP5G3P48201 142 aa14.61□□□□□ -0.07
CHMP6-204ENST00000572778 FGF8P55075 233 aaPredicted RBP14.61□□□□□ -0.07
CHMP6-204ENST00000572778 ANXA2RQ3ZCQ2 193 aa14.61□□□□□ -0.07
CHMP6-204ENST00000572778 TMEM88Q6PEY1 159 aa14.61□□□□□ -0.07
CHMP6-204ENST00000572778 Q6ZNX1 250 aa14.61□□□□□ -0.07
CHMP6-204ENST00000572778 GAGE12BA1L429 117 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 PFDN1O60925 122 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 GAGE7O76087 117 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 TCRAP04437 139 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 GAGE12FP0CL80 117 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 GAGE12GP0CL81 117 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 GAGE12IP0CL82 117 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 SGK494Q96LW2 274 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 TP53TG3Q9ULZ0 132 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 EPDR1Q9UM22 224 aa14.6□□□□□ -0.07
CHMP6-204ENST00000572778 SERTM2A0A1B0GWG4 89 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 MAP1LC3B2A6NCE7 125 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 GGTLC3B5MD39 225 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 K7EQM0 130 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 DAZ2Q13117 558 aaKnown RBP14.59□□□□□ -0.07
CHMP6-204ENST00000572778 MUC21Q5SSG8 566 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 TMUB2Q71RG4 321 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 MAP1LC3BQ9GZQ8 125 aa14.59□□□□□ -0.07
CHMP6-204ENST00000572778 A0A1W2PRE2 83 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 SEC11BP0C7V7 166 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 UBE2G2P60604 165 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 EIF5AP63241 154 aaKnown RBP14.58□□□□□ -0.08
CHMP6-204ENST00000572778 Q6AWC8 147 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 C11orf72Q8NBR9 251 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 TREM1Q9NP99 234 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 KLF12Q9Y4X4 402 aa14.58□□□□□ -0.08
CHMP6-204ENST00000572778 F6UZH7 168 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 FHITP49789 147 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 Q6ZTI0 123 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 TCTE3Q8IZS6 198 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 LINC00612Q8N6U2 182 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 STOML3Q8TAV4 291 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 TVP23CQ96ET8 276 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 NDFIP1Q9BT67 221 aa14.57□□□□□ -0.08
CHMP6-204ENST00000572778 hCG_2014768A0A024R1R8 64 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 IFNA7P01567 189 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 P0DMU3 169 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 FAM231AP0DMU4 169 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 FAM231CP0DMU5 169 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 TCL1AP56279 114 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 IBA57Q5T440 356 aaKnown RBP14.56□□□□□ -0.08
CHMP6-204ENST00000572778 FAM159AQ6UWV7 190 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 CYB561D1Q8N8Q1 229 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 NAGKQ9UJ70 344 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 PSG8Q9UQ74 426 aa14.56□□□□□ -0.08
CHMP6-204ENST00000572778 TRGV1A0A0A0MS02 117 aa14.55□□□□□ -0.08
CHMP6-204ENST00000572778 UMAD1C9J7I0 102 aa14.55□□□□□ -0.08
CHMP6-204ENST00000572778 FAM213BQ8TBF2 198 aa14.55□□□□□ -0.08
CHMP6-204ENST00000572778 ATG101Q9BSB4 218 aa14.55□□□□□ -0.08
CHMP6-204ENST00000572778 VPS13DQ5THJ4 4388 aa14.54□□□□□ -0.08
CHMP6-204ENST00000572778 TPT1P13693 172 aaKnown RBP14.54□□□□□ -0.08
CHMP6-204ENST00000572778 FLI1Q01543 452 aaPredicted RBP14.54□□□□□ -0.08
CHMP6-204ENST00000572778 ZNF415Q09FC8 603 aa14.54□□□□□ -0.08
CHMP6-204ENST00000572778 OR5I1Q13606 314 aa14.54□□□□□ -0.08
CHMP6-204ENST00000572778 PRNTQ86SH4 94 aa14.54□□□□□ -0.08
CHMP6-204ENST00000572778 C15orf53Q8NAA6 179 aa14.54□□□□□ -0.08
CHMP6-204ENST00000572778 TRGV2A0A075B6R0 118 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 TRAV21A0A0B4J279 112 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 FAM74A7A6NL05 159 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 TMEM183BQ1AE95 376 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 TMEM183AQ8IXX5 376 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 SFT2D1Q8WV19 159 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 C8orf49Q96NF6 230 aa14.53□□□□□ -0.08
CHMP6-204ENST00000572778 NKX6-2Q9C056 277 aaPredicted RBP14.53□□□□□ -0.08
CHMP6-204ENST00000572778 SPINK4O60575 86 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 NUDT3O95989 172 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 IGLV2-11P01706 119 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 LGALSLQ3ZCW2 172 aaPredicted RBP14.52□□□□□ -0.09
CHMP6-204ENST00000572778 UBE2DNLQ8IWF7 75 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 POM121L12Q8N7R1 296 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 TMEM75Q8N9X5 138 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 LINC00479Q96M42 142 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 MDFICQ9P1T7 246 aa14.52□□□□□ -0.09
CHMP6-204ENST00000572778 TRGV11A0A075B6L2 103 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 TRAV34A0A0B4J273 112 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 A0A1B0GV50 99 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 FBLL1A6NHQ2 334 aaKnown RBP14.51□□□□□ -0.09
CHMP6-204ENST00000572778 C1QBP02746 253 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 PPT1P50897 306 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 CST9LP1Q5W188 147 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 AKAP14Q86UN6 197 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 MBD3L1Q8WWY6 194 aa14.51□□□□□ -0.09
CHMP6-204ENST00000572778 MRPL16Q9NX20 251 aaKnown RBP14.51□□□□□ -0.09
CHMP6-204ENST00000572778 PEX7O00628 323 aa14.5□□□□□ -0.09
CHMP6-204ENST00000572778 HOXA5P20719 270 aa14.5□□□□□ -0.09
CHMP6-204ENST00000572778 ZFP69Q49AA0 526 aa14.5□□□□□ -0.09
CHMP6-204ENST00000572778 DPPA3Q6W0C5 159 aa14.5□□□□□ -0.09
CHMP6-204ENST00000572778 TRAV26-1A0A087WT03 109 aa14.49□□□□□ -0.09
CHMP6-204ENST00000572778 GNRH2O43555 120 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms