RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 PTTG1O95997 202 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 OR5G3P0C626 314 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 RBMY1DP0C7P1 496 aaKnown RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 METTL15P1P0C7V9 234 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 ORM2P19652 201 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 SULT1A1P50225 295 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 ZNF90Q03938 601 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 BAXQ07812 192 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 OR2F1Q13607 317 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 USF2Q15853 346 aaPredicted RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 ATP6V1FQ16864 119 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 SPATA31B1PQ5VZV4 182 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 MORN3Q6PF18 240 aaPredicted RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 TMEM14EPQ6UXP3 125 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 LINC00322Q6ZN03 302 aaPredicted RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 CYP2G1PQ6ZSU1 146 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 ACOT7LQ6ZUV0 252 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 STHQ8IWL8 128 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 MRPL53Q96EL3 112 aaKnown RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 C9orf85Q96MD7 179 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 LINC00167Q96N53 147 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 SEC22CQ9BRL7 303 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 SPXQ9BT56 116 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 SLC25A31Q9H0C2 315 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 NRN1Q9NPD7 142 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 KCNIP2Q9NS61 270 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 UQCC1Q9NVA1 299 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 PRO0461Q9UI25 63 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 HIGD1AQ9Y241 93 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 TP53TG1Q9Y2A0 90 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 CMYA5Q8N3K9 4069 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 IGKV1D-37A0A075B6S9 117 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 IGKV1OR2-108A0A075B7D4 117 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 XKRY2A2RUG3 117 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 C17orf112F2Z3M2 114 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 H0Y8G0 127 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 ISLRO14498 428 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 COX7A2P2O60397 106 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 CST7O76096 145 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 LINC00869P0C866 280 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 RPL7P18124 248 aaKnown RBP2.7□□□□□ -1.98
NUP88-202ENST00000570937 CAMLGP49069 296 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 PSMB3P49720 205 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 DEFB131AP59861 70 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 RRAS2P62070 204 aaPredicted RBP2.7□□□□□ -1.98
NUP88-202ENST00000570937 FLI1Q01543 452 aaPredicted RBP2.7□□□□□ -1.98
NUP88-202ENST00000570937 IFITM3Q01628 133 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 SLC38A11Q08AI6 406 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 PSMG4Q5JS54 123 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 EBLN2Q6P2I7 272 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 APRG1Q8IVJ8 170 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 TMEM252Q8N6L7 170 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 ZNF709Q8N972 641 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 OR1L4Q8NGR5 311 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 LRRC20Q8TCA0 184 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 DCANP1Q8TF63 244 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 ASB13Q8WXK3 278 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 VSIG2Q96IQ7 327 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 LINC00052Q96N35 136 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 PFDN5Q99471 154 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 ARL6Q9H0F7 186 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 MED28Q9H204 178 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 SLC25A22Q9H936 323 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 RPRMQ9NS64 109 aa2.7□□□□□ -1.98
NUP88-202ENST00000570937 LYRM2Q9NU23 88 aaPredicted RBP2.7□□□□□ -1.98
NUP88-202ENST00000570937 RCL1Q9Y2P8 373 aaKnown RBP2.7□□□□□ -1.98
NUP88-202ENST00000570937 COL7A1Q02388 2944 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 FAM24AA6NFZ4 105 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 AGPAT2O15120 278 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 CA1P00915 261 aaPredicted RBP2.69□□□□□ -1.98
NUP88-202ENST00000570937 IFNA5P01569 189 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 ZNF688P0C7X2 276 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 SMIM6P0DI80 62 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 RPL29P47914 159 aaKnown RBP2.69□□□□□ -1.98
NUP88-202ENST00000570937 PLP1P60201 277 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 HERV-K104P63124 156 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 IFITM2Q01629 132 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 FGL1Q08830 312 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 IL15RAQ13261 267 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 OXA1LQ15070 435 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 GUK1Q16774 197 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 ACTL10Q5JWF8 245 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 C10orf113Q5VZT2 155 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 LINC00305Q7Z4B0 112 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 BPIFA4PQ86YQ2 179 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 OR5C1Q8NGR4 320 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 MUC7Q8TAX7 377 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 SCGB1C1Q8TD33 95 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 PPP1R1CQ8WVI7 109 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 RARRES2Q99969 163 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 SHANK2-AS3Q9BTD1 123 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 RSG1Q9BU20 258 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 SLC25A39Q9BZJ4 359 aaPredicted RBP2.69□□□□□ -1.98
NUP88-202ENST00000570937 MFFQ9GZY8 342 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 WFDC10AQ9H1F0 79 aa2.69□□□□□ -1.98
NUP88-202ENST00000570937 PRKDCP78527 4128 aaKnown RBP2.68□□□□□ -1.98
NUP88-202ENST00000570937 UBE2L5PA0A1B0GUS4 154 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 IGSF23A1L1A6 192 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 CCNKO75909 580 aa2.68□□□□□ -1.98
NUP88-202ENST00000570937 SIX6O95475 246 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms