RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 PNRC1Q12796 327 aaPredicted RBP11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 SPINK13Q1W4C9 94 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 CLUHP3Q96NS8 147 aa11.36□□□□□ -0.59
HERPUD1-219ENST00000570273 GCGP01275 180 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 OR5I1Q13606 314 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 PRR9Q5T870 116 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 BIN3Q9NQY0 253 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 GPX1P07203 203 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 CDKN1BP46527 198 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 COX8CQ7Z4L0 72 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 SVBPQ8N300 66 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 ISOC2Q96AB3 205 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 TUBA4BQ9H853 241 aa11.35□□□□□ -0.59
HERPUD1-219ENST00000570273 KLLNB2CW77 178 aa11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 S100A1P23297 94 aa11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 RNASE4P34096 147 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 NUTF2P61970 127 aaKnown RBP11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 KIR3DS1Q14943 382 aa11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
HERPUD1-219ENST00000570273 TRAV12-2A0A075B6T6 113 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 C7orf71A4D174 169 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 SH2D1AO60880 128 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 AMBPP02760 352 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 GFI1BQ5VTD9 330 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 AGRNO00468 2067 aa11.33□□□□□ -0.6
HERPUD1-219ENST00000570273 SNAPINO95295 136 aa11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 IGHV4-30-4P0DP06 118 aa11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 ERVFC1-1P60608 527 aa11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 KPRPQ5T749 579 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 MORN3Q6PF18 240 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 DAZAP1Q96EP5 407 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 SFRP2Q96HF1 295 aa11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
HERPUD1-219ENST00000570273 LOC102724200A0A096LPH7 203 aaPredicted RBP11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 INSP01308 110 aa11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 CRIP1P50238 77 aa11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 C15orf54Q8N8G6 183 aa11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
HERPUD1-219ENST00000570273 TRAV12-3A0A0B4J271 114 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 P01737 135 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 RHEBQ15382 184 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 Q6AWC8 147 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 FAM231DQ6ZW35 169 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 OSTCQ9NRP0 149 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 MEGF8Q7Z7M0 2845 aa11.3□□□□□ -0.6
HERPUD1-219ENST00000570273 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 B4DEV8 164 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 PRB2P02812 416 aaPredicted RBP11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 RNF212Q495C1 297 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 NUDT10Q8NFP7 164 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 OR10G8Q8NGN5 311 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 NUDT11Q96G61 164 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
HERPUD1-219ENST00000570273 C7orf77A4D0Y5 90 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 APOC4P55056 127 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 Q6ZQT7 251 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 RPS10P5Q9NQ39 176 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
HERPUD1-219ENST00000570273 H7BYZ3 331 aa11.27□□□□□ -0.6
HERPUD1-219ENST00000570273 PPP1R2P9O14990 202 aa11.27□□□□□ -0.6
HERPUD1-219ENST00000570273 ORM1P02763 201 aa11.27□□□□□ -0.6
HERPUD1-219ENST00000570273 GIG44P09565 113 aaPredicted RBP11.27□□□□□ -0.6
HERPUD1-219ENST00000570273 OR2D3Q8NGH3 330 aa11.27□□□□□ -0.6
HERPUD1-219ENST00000570273 TMSB15BA0A087X1C1 80 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 KIR2DL5BA0A0G2JN68 375 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 KIR2DL5BA0A0G2JPC4 375 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 TMEM189A5PLL7 270 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 RBMY1A1P0DJD3 496 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 RBMY1CP0DJD4 496 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 RPL19P84098 196 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 ATRAIDQ6UW56 229 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 KIR2DL5AQ8N109 375 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 C11orf21Q9P2W6 132 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 A8MZ25 164 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
HERPUD1-219ENST00000570273 V9GYV3 84 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms