RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GAGE7O76087 117 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 GAGE12FP0CL80 117 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 GAGE12GP0CL81 117 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 GAGE12IP0CL82 117 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 GCHFRP30047 84 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 GNG5P63218 68 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 CMTM2Q8TAZ6 248 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 GSN-AS1Q9NRJ2 163 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.94
CNOT1-220ENST00000569916 IGHV1OR15-1A0A075B7D0 117 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 RGS13O14921 159 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 TCL1AP56279 114 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 Q6ZTI0 123 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 GOLT1AQ6ZVE7 132 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 ST6GAL2Q96JF0 529 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 ACTR3CQ9C0K3 210 aaPredicted RBP9.14□□□□□ -0.95
CNOT1-220ENST00000569916 CYTL1Q9NRR1 136 aa9.14□□□□□ -0.95
CNOT1-220ENST00000569916 TRAV8-1A0A0A6YYK1 113 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 TAAR5O14804 337 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 CXorf1O96002 111 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 IBA57Q5T440 356 aaKnown RBP9.13□□□□□ -0.95
CNOT1-220ENST00000569916 Q6AWC8 147 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
CNOT1-220ENST00000569916 GGTLC3B5MD39 225 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 SPINK4O60575 86 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 HOXA5P20719 270 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 ZNF345Q14585 488 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 RNF212Q495C1 297 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 MUC21Q5SSG8 566 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 C5orf17Q8NAS9 161 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 C18orf15Q96N68 181 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 TMPRSS5Q9H3S3 457 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 TMEM167BQ9NRX6 74 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 DNAH2Q9P225 4427 aa9.12□□□□□ -0.95
CNOT1-220ENST00000569916 TRGV1A0A0A0MS02 117 aa9.11□□□□□ -0.95
CNOT1-220ENST00000569916 CTXND1A0A1B0GTU2 59 aa9.11□□□□□ -0.95
CNOT1-220ENST00000569916 SERTM2A0A1B0GWG4 89 aa9.11□□□□□ -0.95
CNOT1-220ENST00000569916 TCRAP04437 139 aa9.11□□□□□ -0.95
CNOT1-220ENST00000569916 OR11H4Q8NGC9 324 aa9.11□□□□□ -0.95
CNOT1-220ENST00000569916 F6UZH7 168 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 NUDT3O95989 172 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 ZNF415Q09FC8 603 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 OR5I1Q13606 314 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 AKR1C8PQ5T2L2 129 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 KCNRGQ8N5I3 272 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 SGK494Q96LW2 274 aa9.1□□□□□ -0.95
CNOT1-220ENST00000569916 TRGV2A0A075B6R0 118 aa9.09□□□□□ -0.95
CNOT1-220ENST00000569916 TRAV26-1A0A087WT03 109 aa9.09□□□□□ -0.95
CNOT1-220ENST00000569916 HMSDA8MTL9 139 aa9.09□□□□□ -0.95
CNOT1-220ENST00000569916 SUMO1P63165 101 aaKnown RBP9.09□□□□□ -0.95
CNOT1-220ENST00000569916 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
CNOT1-220ENST00000569916 TREM1Q9NP99 234 aa9.09□□□□□ -0.95
CNOT1-220ENST00000569916 MRPL16Q9NX20 251 aaKnown RBP9.09□□□□□ -0.95
CNOT1-220ENST00000569916 MDFICQ9P1T7 246 aa9.09□□□□□ -0.95
CNOT1-220ENST00000569916 DNAH17Q9UFH2 4485 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 IGLV2-18A0A075B6J9 118 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 A0A0J9YY99 117 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 A0A1W2PRE2 83 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 H3BNG1 76 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 M0R2N4 97 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 IGLV2-11P01706 119 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-220ENST00000569916 FAM3BP58499 235 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-220ENST00000569916 TMEM183BQ1AE95 376 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 TDRG1Q3Y452 100 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 C4orf48Q5BLP8 95 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 TMEM183AQ8IXX5 376 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 CYB561D1Q8N8Q1 229 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 NAGKQ9UJ70 344 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 EPDR1Q9UM22 224 aa9.08□□□□□ -0.96
CNOT1-220ENST00000569916 MUC4Q99102 2169 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 HECTD4Q9Y4D8 3996 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 TRGV11A0A075B6L2 103 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 MAP1LC3B2A6NCE7 125 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 K7EQM0 130 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 Q6ZR54 194 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 VSIG2Q96IQ7 327 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 C8orf49Q96NF6 230 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 NDFIP1Q9BT67 221 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 MAP1LC3BQ9GZQ8 125 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
CNOT1-220ENST00000569916 A0A0D9SG52 128 aa9.06□□□□□ -0.96
CNOT1-220ENST00000569916 BCL2L11O43521 198 aa9.06□□□□□ -0.96
CNOT1-220ENST00000569916 ZNF80P51504 273 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-220ENST00000569916 UBE2G2P60604 165 aa9.06□□□□□ -0.96
CNOT1-220ENST00000569916 FLI1Q01543 452 aaPredicted RBP9.06□□□□□ -0.96
CNOT1-220ENST00000569916 ZNRF2Q8NHG8 242 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms