RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 ANKRD39Q53RE8 183 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 CST9LP1Q5W188 147 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 PET117Q6UWS5 81 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 TMEM256Q8N2U0 113 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 GPHA2Q96T91 129 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 OR2D2Q9H210 308 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 NPVFQ9HCQ7 196 aa8.01□□□□□ -1.13
CDH3-208ENST00000569036 LRP2P98164 4655 aa8□□□□□ -1.13
CDH3-208ENST00000569036 PRSS46E5RG02 174 aa8□□□□□ -1.13
CDH3-208ENST00000569036 ISLRO14498 428 aa8□□□□□ -1.13
CDH3-208ENST00000569036 SERF1AO75920 110 aa8□□□□□ -1.13
CDH3-208ENST00000569036 OR2J3O76001 311 aa8□□□□□ -1.13
CDH3-208ENST00000569036 TOMM40O96008 361 aa8□□□□□ -1.13
CDH3-208ENST00000569036 IGHV3-23P01764 117 aa8□□□□□ -1.13
CDH3-208ENST00000569036 CRYGBP07316 175 aa8□□□□□ -1.13
CDH3-208ENST00000569036 GCHFRP30047 84 aa8□□□□□ -1.13
CDH3-208ENST00000569036 ATP5G3P48201 142 aa8□□□□□ -1.13
CDH3-208ENST00000569036 ERVK-16P61578 105 aa8□□□□□ -1.13
CDH3-208ENST00000569036 IZUMO4Q1ZYL8 232 aa8□□□□□ -1.13
CDH3-208ENST00000569036 ZNF436-AS1Q8NC38 126 aaPredicted RBP8□□□□□ -1.13
CDH3-208ENST00000569036 SMIM12Q96EX1 92 aa8□□□□□ -1.13
CDH3-208ENST00000569036 ATG101Q9BSB4 218 aa8□□□□□ -1.13
CDH3-208ENST00000569036 C15orf61A6NNL5 157 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 DIRC3C9JPN6 131 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 IGLV2-23P01705 113 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 ARL14EPLP0DKL9 152 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 G6PCP35575 357 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 TAS2R45P59539 299 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 CLEC19AQ6UXS0 136 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 PQLC2Q6ZP29 291 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 MMD2Q8IY49 270 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 TP53TG3Q9ULZ0 132 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 X6R8D5 127 aa7.99□□□□□ -1.13
CDH3-208ENST00000569036 TRBV20OR9-2A0A075B6H5 130 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 A0A1W2PRE2 83 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 SNURFLB1AK76 121 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 K7EP13 123 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 ZNF324O75467 553 aaPredicted RBP7.98□□□□□ -1.13
CDH3-208ENST00000569036 IGLC2P0DOY2 106 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 IGLC3P0DOY3 106 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 GNG4P50150 75 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 HNRNPA3P51991 378 aaKnown RBP7.98□□□□□ -1.13
CDH3-208ENST00000569036 LINC00310P59036 64 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 POU2AF1Q16633 256 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 TIGITQ495A1 244 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 SAPCD1Q5SSQ6 148 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 TEPPQ6URK8 271 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 OR4A16Q8NH70 328 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 OCC1Q8TAD7 63 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 ADTRPQ96IZ2 230 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 MRPL32Q9BYC8 188 aaKnown RBP7.98□□□□□ -1.13
CDH3-208ENST00000569036 SLC35D1Q9NTN3 355 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 S4R3C0 116 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 V9GYV3 84 aa7.98□□□□□ -1.13
CDH3-208ENST00000569036 SCO2A0A1W2PP80 73 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 F8W735 103 aaPredicted RBP7.97□□□□□ -1.13
CDH3-208ENST00000569036 NPSP0C0P6 89 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 MYOD1P15172 320 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 DUTP33316 252 aaKnown RBP7.97□□□□□ -1.13
CDH3-208ENST00000569036 RPL30P62888 115 aaKnown RBP7.97□□□□□ -1.13
CDH3-208ENST00000569036 OR5I1Q13606 314 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 PRSS8Q16651 343 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 SPATA45Q537H7 98 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 LEMD1Q68G75 181 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 ATP5L2Q7Z4Y8 100 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 PDPNQ86YL7 162 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 SLC24A4Q8NFF2 622 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 OR4S2Q8NH73 311 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 VN1R17PQ8TDU5 208 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 MGST2Q99735 147 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 BET1LQ9NYM9 111 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 LAMTOR2Q9Y2Q5 125 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 UFC1Q9Y3C8 167 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 PAM16Q9Y3D7 125 aa7.97□□□□□ -1.13
CDH3-208ENST00000569036 SMIM27A0A1W2PRY6 76 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 GIG44P09565 113 aaPredicted RBP7.96□□□□□ -1.14
CDH3-208ENST00000569036 AMTP48728 403 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 TMEM136Q6ZRR5 245 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 Q8N976 141 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 ZNF114Q8NC26 417 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 ZNF738Q8NE65 137 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 SRSF12Q8WXF0 261 aaKnown RBP7.96□□□□□ -1.14
CDH3-208ENST00000569036 BORCS7Q96B45 105 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 TXN2Q99757 166 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 DNAJC4Q9NNZ3 241 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 NRN1Q9NPD7 142 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 HEYLQ9NQ87 328 aaPredicted RBP7.96□□□□□ -1.14
CDH3-208ENST00000569036 ZNF257Q9Y2Q1 563 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.14
CDH3-208ENST00000569036 KRTAP9-6A0A140TA67 174 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 HELTA6NFD8 242 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 NUPR1O60356 82 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 PROP1O75360 226 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 APOA2P02652 100 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 LINC00869P0C866 280 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 PMCHP20382 165 aa7.95□□□□□ -1.14
CDH3-208ENST00000569036 NPY1RP25929 384 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms