RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 LOC102723971A0A1B0GUV8 181 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 C11orf94C9JXX5 98 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 RBMY1A1P0DJD3 496 aaKnown RBP8.79□□□□□ -1
SF3B3-208ENST00000567250 RBMY1CP0DJD4 496 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 ATP5G3P48201 142 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 RBMY1FQ15415 496 aaKnown RBP8.79□□□□□ -1
SF3B3-208ENST00000567250 SAPCD1Q5SSQ6 148 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 CCDC28AQ8IWP9 274 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 MUC7Q8TAX7 377 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 C16orf74Q96GX8 76 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 TREM1Q9NP99 234 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 PSG8Q9UQ74 426 aa8.79□□□□□ -1
SF3B3-208ENST00000567250 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
SF3B3-208ENST00000567250 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
SF3B3-208ENST00000567250 PMS2P11Q13670 270 aa8.78□□□□□ -1
SF3B3-208ENST00000567250 KIR3DS1Q14943 382 aa8.78□□□□□ -1
SF3B3-208ENST00000567250 ZNF493Q6ZR52 646 aa8.78□□□□□ -1
SF3B3-208ENST00000567250 Q86TA4 180 aa8.78□□□□□ -1
SF3B3-208ENST00000567250 C11orf45Q8TAV5 145 aa8.78□□□□□ -1
SF3B3-208ENST00000567250 TMEM263Q8WUH6 116 aaKnown RBP8.78□□□□□ -1
SF3B3-208ENST00000567250 C3orf84H3BNL1 204 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 RGS13O14921 159 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 DEFB4AO15263 64 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 S100A9P06702 114 aaKnown RBP8.77□□□□□ -1.01
SF3B3-208ENST00000567250 BCL2P10415 239 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 HTN1P15515 57 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 MEF2BQ02080 365 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-208ENST00000567250 Q6AWC8 147 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 ZNF680Q8NEM1 530 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 SGK494Q96LW2 274 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 LINC00467Q9BRT7 94 aa8.77□□□□□ -1.01
SF3B3-208ENST00000567250 TRAV21A0A0B4J279 112 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 CXorf65A6NEN9 183 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 ZNF705GA8MUZ8 300 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-208ENST00000567250 PDE6DO43924 150 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 IGLV2-11P01706 119 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 SPART-AS1P0CW21 52 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 SMUG1Q53HV7 270 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 PRR9Q5T870 116 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 TEX261Q6UWH6 196 aa8.76□□□□□ -1.01
SF3B3-208ENST00000567250 EIF4E3Q8N5X7 224 aaKnown RBP8.76□□□□□ -1.01
SF3B3-208ENST00000567250 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 TRBV6-1A0A0K0K1D8 114 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 CBY3A6NI87 242 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 LYRM9A8MSI8 78 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 ZNF324O75467 553 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-208ENST00000567250 EMP1P54849 157 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 CCL20P78556 96 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 TMEM183BQ1AE95 376 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 FAM159AQ6UWV7 190 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 RNASE8Q8TDE3 154 aaKnown RBP8.75□□□□□ -1.01
SF3B3-208ENST00000567250 VAX2Q9UIW0 290 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 ZFP30Q9Y2G7 519 aa8.75□□□□□ -1.01
SF3B3-208ENST00000567250 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 TRAV34A0A0B4J273 112 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 NUPR2A6NF83 97 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 GCGP01275 180 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 PFN1P07737 140 aaKnown RBP8.74□□□□□ -1.01
SF3B3-208ENST00000567250 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 LYPD6BQ8NI32 183 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 C2CD4CQ8TF44 421 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 C11orf52Q96A22 123 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
SF3B3-208ENST00000567250 LTAP01374 205 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 ZNF415Q09FC8 603 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 IBA57Q5T440 356 aaKnown RBP8.73□□□□□ -1.01
SF3B3-208ENST00000567250 FAM222AQ5U5X8 452 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 TVP23CQ96ET8 276 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 LINC00479Q96M42 142 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 C8orf49Q96NF6 230 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 DKK2Q9UBU2 259 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 NAGKQ9UJ70 344 aa8.73□□□□□ -1.01
SF3B3-208ENST00000567250 TIMM8BQ9Y5J9 83 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-208ENST00000567250 NANOS2P60321 138 aaKnown RBP8.72□□□□□ -1.01
SF3B3-208ENST00000567250 TDRG1Q3Y452 100 aa8.72□□□□□ -1.01
SF3B3-208ENST00000567250 MUC21Q5SSG8 566 aa8.72□□□□□ -1.01
SF3B3-208ENST00000567250 COX8CQ7Z4L0 72 aa8.72□□□□□ -1.01
SF3B3-208ENST00000567250 SDF2L1Q9HCN8 221 aa8.72□□□□□ -1.01
SF3B3-208ENST00000567250 CELA1Q9UNI1 258 aa8.72□□□□□ -1.01
SF3B3-208ENST00000567250 TRAV10A0A0B4J240 114 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 RBFOX3A6NFN3 312 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 AZU1P20160 251 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 RPL35P42766 123 aaKnown RBP8.71□□□□□ -1.02
SF3B3-208ENST00000567250 TCL1AP56279 114 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 DAD1P61803 113 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 TMEM183AQ8IXX5 376 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 SMIM12Q96EX1 92 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 MED9Q9NWA0 146 aa8.71□□□□□ -1.02
SF3B3-208ENST00000567250 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 TMEM250H0YL14 139 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 NDUFS6O75380 124 aaKnown RBP8.7□□□□□ -1.02
SF3B3-208ENST00000567250 PRM2P04554 102 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 RAB14P61106 215 aa8.7□□□□□ -1.02
SF3B3-208ENST00000567250 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
SF3B3-208ENST00000567250 TOR2AQ5JU69 321 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms